Gene detail

Detailed information of KAJ7380639.1 in Desmophyllum pertusum

Genomic Location: MU826352.1:259423...278945
NR annotation: KAJ7380639.1, hypothetical protein OS493_007004 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAJ7380639.1

ATGCAAGAAGCATTGTGTTACTCAAAGACAAAGCGAAGCATTCTTTCAGAAAAAGAAACATCCAGAATACCTGTGAAAATTGCGCACTTTGCCAAAACCTTAGACGGCAGAAAGCTGGTAATAAATGACATTACCAGTCTCACAGCTCCAAACGACTTGGAATACTCATTCCAGTTCTCTGAACAGCCTGAAGAACAATCCTTCGTACAACTGCATCAGCTCTCAAGCAATGAAACACCAGAAGACAAAATAACAGTCTGTTGTAAAGTCCTGAAAGTTGGTGCTACAAAGGTTGTTGGACAAGCAAAATATACCGTGGCTAACATAACAATAGCTGATGTCACTAGACAAATAGTTCTGGATGTATGGAATAACCAAATTCCCCACATTAAGGAGAACAAAGTATACAAATTCACAAACCTAAGTGGTGATGATAGTGAGGAAGACTTATGTGTCGTTACTCCTGGATTCGTGGGATGTAACCAGCAAAAGAAATCTAAGGGAGAAGACAATCTCAAGGATAAAGTTTTTGACGTTTCATCGGACGAGGAAATGAACTGCTTTGAGTGTTCTTCAGTGATAAGCGATGGAGATATTGGTCTGATGGACCATTTAAAGAAAGAACATTGGTCCTCGGAGGAATCATCATCTTTGTGTTCTGAAGATATGGAGGAAAAAGAATTCAATAAGTGTAGAGATTGTGGCAAGTACTTTTCAGCACAGAGCAACTTAAGAAAGCACAAACGATTGGCTCGCTGTAAAGGGACATCACATGAACACAAAAAGGCATTTCACAAAGAACCAAAGCGTCATCAAGAAAAAGACAACTTGGAAATTCATGCTAATATGTCAAACAGAAAGCTTGGACCAGAAATATGGAAAACCTGTAAAGTGCAAGAGGTGGAAGCGCTTCCTTACAACGTTGATGGACTGTGTGTATATAAGCTCCCATTCAAAAAGGAGGCAATGATGCAAAGTTCAGTGGACGGAAGGCCCTGGGGCAGATGGAAGTCTTCAAGCAGAAAGAACCTGAATGGAACACGCCGAGTAGCTGAGTGTGGCGGGACGTACGAATGCGTAAACGTGGCTTGCCCCTATTTTAAGACATACTGGCACAAGAACACCGTACAGTTCCAAAAGCTTCCACCTGAAGTGGTTTGCTCTTGCTGTGGCTATAGCGCAAAACCAATAAAGTGCTTAGCGAGAAAGATTTGGGAGTTCCCCGACGGCGCCAGCCATGTACTAGTTTACCACTATGGAACCCACAAATGCACGGCCATCAAACCAAGTATCGACGTTTCAAGTGAAGTGACCAAATTCTTTAAAGACAACAGCTCTGCAAAACCTTCTCAATGTGCGTATGAGTCTTTGAAGACTACCCTTCACGAAACCAAAGATGTTGAAGAAGTATACAAGAAAGCTAAGGGTTACGCAGATTACAAGAAAATACAGAATGTCAAACAAAAAGAATCATCATCTTTGTGTTCTGAAGATATGGAGGAAAAAGAATTCAATAAGTGTAGAGATTGTGGCAAGTACTTTTCAGCACAGAGCAACTTAAGAAAGCACAAACGATTGGCTCGCTGTAAAGGGACATCACATGAACACAAAAAGGCATTTCACAAAGAACCAAAGCGTCATCAAGAAAAAGACAACTTGGAAATTCATGCTAATATGTCAAACAGAAAGCTTGGACCAGAAATATGGAAAACCTGTAAAGTGCAAGAGGTGGAAGCGCTTCCTTACAACGTTGATGGACTGTGTGTATATAAGCTCCCATTCAAAAAGGAGGCAATGATGCAAAGTTCAGTGGACGGAAGGCCCTGGGGCAGATGGAAGTCTTCAAGCAGAAAGAACCTGAATGGAACACGCCGAGTAGCTGAGTGTGGCGGGACGTACGAATGCGTAAACGTGGCTTGCCCCTATTTTAAGACATACTGGCACAAGAACACCGTACAGTTCCAAAAGCTTCCACCTGAAGTGGTTTGCTCTTGCTGTGGCTATAGCGCAAAACCAATAAAGTGCTTAGCGAGAAAGATTTGGGAGTTCCCCGACGGCGCCAGCCATGTACTAGTTTACCACTATGGAACCCACAAATGCACGGCCATCAAACCAAGTATCGACGTTTCAAGTGAAGTGACCAAATTCTTTAAAGACAACAGCTCTGCAAAACCTTCTCAATGTGCGTATGAGTCTTTGAAGACTACCCTTCACGAAACCAAAGATGTTGAAGAAGTATACAAGAAAGCTAAGGGTTACGCAGATTACAAGAAAATACAGAATGTCAAACAAAAAGTTTTGGAGAGCATTAATCCTTTTTTATTTATTTTTTTATTTATTATTATTTTTTTTTAA

Transcript

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR050527	Family	Snail/Krueppel C2H2-type Zinc-finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24388	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan