Gene detail

Detailed information of KAJ7380933.1 in Desmophyllum pertusum

Genomic Location: MU826351.1:1072465...1079516
NR annotation: KAJ7380933.1, Deubiquitinating protein VCIP135 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7380933.1

ATGCAGAAGAGACGGAGTGGTGAAGGAGTCAAGAAAACACCGGAGAAAGAAGCTAAAGTTCCAAAACAACAGACTGGTGTCAAACCTCAACAAGCTGGTCCTAGTAAAGGTGGTGAGAACCAAGTCTCACAACCTGCTGTGAAACAACGAACAGACAAGAAGGTGCGCCTGTCGACATCTGATGGCAGGCAGTGCATGTTAACTCTTGCCATGGACACAACATTCAAACAGTTTCAAAACCTGATTGAAAAAGAGCTTGGCATTCCTCCAGAAGAGCTAAGGATTAGGTACGGATTTCCACCCCGTGAACTGCATCCTCCTGCCGAGGGACATGAAGAGGATCCAGTTCCTTTGCAGCATGGCGACAGAGTGATGGTGGAACACTTAAAGCCTGTTGTCCCTAAGGAGCACCCCCCTGATGTGGTTATGTCAGAAGAGAAAGTCCAGGGGGGTGAGGGCAGTGCTCCTCCTGAGGCAAGAGGGACTGTGGCAGAGGCAAAAAGTAGTCAACAAAGACAAGCTGAGAACAATGCTGCCATGGCGTCGGCTCTTTTCAGTGCCCTTGGTGCATTGACTCGTGGTGACATGTGGGAAGCAGCAGAGAATTGTCATGAAATGTTTGACAGAGGAGGGTATTATTACAGCAAGGTTGTCAATGATATGGGTCCACTGCAACCAAACCAGCATTGTACTCTTCCTTTCTTTCCAAACAAGGTGTTTGCCTACAATGCTGAAAAAGATCGTTTAGACCTCTGTCTTGGCCAAACACACATCCAAGTTCAGCCACTGGACAGAGAAACATTATTGCTGGCTCACAGTCGTCCAACTCAAGTACCGCCATCAGAGGAAAGGACCAGCAGTCTGTCGAGCGAGGCTAGCTTCAGTGGTGCTATCGGACACAGGGACATGTCACATGCTCACATGGCATTTTCAGGCGAGGGGCGAACTCTGTCTGGTGCGCAATCCTCTCAGAAACACACTGTTGAGTCTCTCCCATCCAGAATTCTGCCAGCCAGCCCCAGCTCTTCACTGATGGTCACAGGTAATGCTGAGGCAGCAGATATCGAGCAAGAAGAAGCTAAGGACATCCAGGGACAGAATTCTAAAGATCTGAACCAAGAAACAAGTCTGTCCTCAGAGTCCATGGTCACCGAGCAAGTAGATGTGGAAAAGCCGAAGGAAAGTGTCCAGGATGTGCTAGAAGAGAACCCTGCTGCTACACAGGATGTTGTACAGATGGACCCGACACAGCCTGGGCAAGTTGAACAGAATACACAGCTTGAGCGTGACGGAAGTGTTGAAGCACAAGTGGAGTGTGTGACGGCAGAGGAAAATGAACGCATGGAAACGAACATTGAACATGTTGCCGATGCGCCCATTGTTGCTGTTAATGATTCAACGAACATCTCTGAGCAAGAAGGCAACGTGAAATGTACAGAACCCGTGACTGAATCAATGGAAACTGATCAACTGACTGTTAAGGAAGATTGCGTGACTCAGGAAGTCACGGTGGTCACGTCAGACCAATCTGATAATCACCCATCAAGCGTCAACATCTCAGAGCAAGAAGGCCACGTAGAATGTACAAAACCTTTGTCACAATCAATGGAAACTAATCAACTGGCTGTTAAGGAAGATTGCGTGACTCAGGAAGTTACGGTGGTCACGTCAGACCAATCTGATAATCACGCATCATGCGCCAACATCTCAGAGCAAGAAGGCCACGTGGAATGTACAGAACCTTCGTCAGAAACAATGGAAACTAATCAACTGACTGTTAAGGAAGATTGCGTGACTCAGGAAGTCACGGTGGTCACGCCAGACCGATCTGATGATCACGCATCAAGAGACAGCGTCACGGAAGGCGAAATGAATGACAAAGTTGTAGGCTCGGAGCTGAGTGATGGCACTGTGGGCTGCATCAGTCCTGGGCCGAGTGACGAAATAATGCCGCAAGTGTCCGTTGCCATGGAGATTGATAATCAGGGAGAAAATAGTGACACTAGTTCGTTAAAGAAACTTGAACGTCCCGAACATGAAACGCCATCCCGCTGTGTCAAGGAATCGGCAACTGTACCGAATAGTGGATCAAATCAACCACTTAATAGCGGAGAGGCCGAAACATCACTGATAATAGACAATGAAACTGCAGCCGGATATGATGAAAATGAAAGTTTGGTGCAACCAGATAACAAGTCGGCAGACAGTGGCCTTAGTGCAGGACCTACAACTACTGCTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96JH7	Deubiquitinating protein VCPIP1 OS=Homo sapiens OX=9606 GN=VCPIP1 PE=1 SV=2
Q8CF97	Deubiquitinating protein VCPIP1 OS=Rattus norvegicus OX=10116 GN=Vcpip1 PE=1 SV=2
Q8CDG3	Deubiquitinating protein VCPIP1 OS=Mus musculus OX=10090 GN=Vcpip1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006707 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21403 all species →	OTU1_UBXL	OTU1, UBXL domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039087 all species →	Family	Deubiquitinating protein VCPIP1	Interproscan
IPR048857 all species →	Domain	OTU1, Ubl domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14843 all species →	DEUBIQUITINATING PROTEIN VCIP135	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016320 all species →	Biological Process	endoplasmic reticulum membrane fusion	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0035871 all species →	Biological Process	protein K11-linked deubiquitination	Interproscan
GO:0071108 all species →	Biological Process	protein K48-linked deubiquitination	Interproscan
GO:0090168 all species →	Biological Process	Golgi reassembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7380933.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.