Gene detail

Detailed information of KAJ7380994.1 in Desmophyllum pertusum

Genomic Location: MU826351.1:2229866...2230552
NR annotation: KAJ7380994.1, Glucose-induced degradation complex subunit [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SWD3	Glucose-induced degradation protein 8 homolog OS=Nematostella vectensis OX=45351 GN=v1g247787 PE=3 SV=1
E7FGY2	Glucose-induced degradation protein 8-B homolog OS=Danio rerio OX=7955 GN=gid8b PE=2 SV=2
Q5ZKQ7	Glucose-induced degradation protein 8 homolog OS=Gallus gallus OX=9031 GN=GID8 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002332 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08513 all species →	LisH	LisH	Domain	Interproscan
PF10607 all species →	CTLH	CTLH/CRA C-terminal to LisH motif domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013144 all species →	Domain	CRA domain	Interproscan
IPR006594 all species →	Conserved_site	LIS1 homology motif	Interproscan
IPR050618 all species →	Family	Ubiquitination and Signaling Pathway Regulator	Interproscan
IPR006595 all species →	Domain	CTLH, C-terminal LisH motif	Interproscan
IPR024964 all species →	Domain	CTLH/CRA C-terminal to LisH motif domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12864 all species →	RAN BINDING PROTEIN 9-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23338	GID8; glucose-induced degradation protein 8	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.