Gene detail

Detailed information of KAJ7380997.1 in Desmophyllum pertusum

Genomic Location: MU826351.1:2250372...2252709
NR annotation: KAJ7380997.1, PHD finger protein 13 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K2W6	PHD finger protein 13 OS=Mus musculus OX=10090 GN=Phf13 PE=2 SV=2
Q86YI8	PHD finger protein 13 OS=Homo sapiens OX=9606 GN=PHF13 PE=1 SV=2
Q5U5E5	PHD finger protein 23A OS=Xenopus tropicalis OX=8364 GN=phf23 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008068 (this species only)
Ubiquitin family	E3\|E3 activity RING\|PHD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20826 all species →	PHD_5	PhD finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001965 all species →	Domain	Zinc finger, PHD-type	Interproscan
IPR011011 all species →	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14571 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27476	PHF23; PHD finger protein 23	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.