Detailed information of KAJ7381142.1 in Desmophyllum pertusum

Genomic Location: MU826351.1:4134283...4138251
NR annotation: KAJ7381142.1, Nuclear factor NF-kappa-B p105 subunit [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6F3J0Nuclear factor NF-kappa-B p105 subunit OS=Canis lupus familiaris OX=9615 GN=NFKB1 PE=2 SV=2
Q63369Nuclear factor NF-kappa-B p105 subunit OS=Rattus norvegicus OX=10116 GN=Nfkb1 PE=1 SV=2
Q04861Nuclear factor NF-kappa-B p105 subunit OS=Gallus gallus OX=9031 GN=NFKB1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000740 (this species only)
Transcription factor familyRHD · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00554
all species →		RHD_DNA_bindRel homology DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR030492
all species →		Conserved_siteRel homology domain, conserved siteInterproscan
IPR037059
all species →		Homologous_superfamilyRel homology domain (RHD), DNA-binding domain superfamilyInterproscan
IPR000451
all species →		FamilyNF-kappa-B/DorsalInterproscan
IPR011539
all species →		DomainRel homology domain, DNA-binding domainInterproscan
IPR008967
all species →		Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24169
all species →		NUCLEAR FACTOR NF-KAPPA-B PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7381142.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP