Detailed information of KAJ7381193.1 in Desmophyllum pertusum

Genomic Location: MU826351.1:4886846...4889763
NR annotation: KAJ7381193.1, hypothetical protein OS493_004794 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7SEP9U1 small nuclear ribonucleoprotein C OS=Nematostella vectensis OX=45351 GN=v1g244745 PE=3 SV=1
Q7PXU6U1 small nuclear ribonucleoprotein C OS=Anopheles gambiae OX=7165 GN=AGAP001584 PE=3 SV=2
E3X5D6U1 small nuclear ribonucleoprotein C OS=Anopheles darlingi OX=43151 GN=AND_004369 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009143 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06220
all species →		zf-U1U1 zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013085
all species →		DomainU1-C, C2H2-type zinc fingerInterproscan
IPR017340
all species →		FamilyU1 small nuclear ribonucleoprotein CInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR003604
all species →		DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR000690
all species →		DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31148
all species →		U1 SMALL NUCLEAR RIBONUCLEOPROTEIN CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0000387
all species →		Biological Processspliceosomal snRNP assemblyInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005685
all species →		Cellular ComponentU1 snRNPInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0000395
all species →		Biological ProcessmRNA 5'-splice site recognitionInterproscan
GO:0030627
all species →		Molecular Functionpre-mRNA 5'-splice site bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7381193.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP