Gene detail

Detailed information of KAJ7382428.1 in Desmophyllum pertusum

Genomic Location: MU825924.1:305900...323019
NR annotation: KAJ7382428.1, hypothetical protein OS493_035077 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7382428.1

ATGCCGTTGCCTTGGAAACAGGCGTATTCCAACCTGGACACATGCCTACAGTTTAAATATAAAACCCAATCAATCAAAGTGTCCTCCTTCTCTATAAAAGTTTATGTTGTACGACCAGAAGGAGAGAAATTGCTCGTGTGGTCGATACATGGTTATCAAGTAGGTCAGTCTACATTAGCAAAGGTGTCTTGGATATCAGAAGAAAACAACAAGGTTCGCTTTGAATGCGTGGCAGTCACAGGGGTGGTCATCTATGACGCAATGATAAAAACGTCGTCATGCGACCTGCAACCTGCATTTGCAAAACCAGGGTACAACTGTACTTGGGACGAATTCCAATGCCAGAACGCCCGGTGTGTAAAACACAGGGCTCGATGTGATGGAACAACAGACTGCCTTGACAACTCAGATGAAATAAACTGCACGTGTCTTCAAAGTCAGTTTCAGTGTCCTTCGGGAGAATGTCTTGCTGCTGGGAAACTTTGCGATGGATACAAAGATTGCTCAGACGGTAGTGATGAAAATAAGCATTGTACATCCAGAGAGACGTCCAGTGAATTCCAGTGTGTAGACGGCAGTTTTGTTTCTTGGTCTAAAACCTGTAAGGATTCCAGGGTTTGTCAAGAAGAAACTCATCAGCCATCGATTTGTGAGTCCGAGCAATGTCCTCTCAACAACTTAAAGTGCTTGAGTCAAACTTCAGAACAAGTGTTTTGTGACTCAAGTTTCAGAGGACTCTGCAATTTTGAGAATGGACTTTGTGGTATGAAGCATGATTTTACATGTGCGTTCACATGGCATTCATGGAAACAAAGAAGAACTATAGTAAAGAATACGCTGAACTTTGATCACACAACACTTTCAGGGAAAGGAAACTACCTTTACTTAGATAGCTTAAAGAAACCTCCAGGTAGCAAGGCCAGGCTCCTAAGTGGTGCTTGGCGACCACCCAGTGAGCCCGCGTGTTTACAATTCTGGTATTATAAGAATGGCGTTGAAAACGGAATACTCAATGTATACGTCATTACAAACAGCTCAGATAGCCTTACATGGAGCCAAAGCGATAACATTGAAAACCGCTGGATATTTGTTCAGATATCACTACACTTGTCCATGTCATTTATGTTTGCCATAGAGGGTGTGGCTGGCAACGATAGTATTAACATTGGACTTGATGACGTCACGTTGTTGGATGGAAATTGCTCCTCGGCTGTTGTACAAGGGAATCCAGGTTGCGACTTTGAGGGAACAAAGTGTGATTGGATTGGCGACGAAGACTGGAAATTAAGTTACATATCACCCACATCGTTTATTCGTGGAAAACAAACAGAAAATCGTGAACACTTCTTATATTTCACTGGAAATGGAACCATTTCCACAAGATTTGTGAATGCTTCATACTGGAAGTGTTTACGATTTTGGTATTACATCCGCGACAAGAGAAAGACTTCGTCCGATTCTAACTCTCTTCATGAACTGGAAGTGTTTTCTGCTAATTCAAATTACTCAACTCTCTGGTCCACGTCTCGTACGACTAAACTCTGGACCTACGTACAGCTGCCACTTATTTCAGATAAATACAATGTTATGATTTCCTTCAGAGGAAAAGTACAATTTAAAGGACAGGCGATAGTTGCCATTGATGATGTCTCTTTTTCGCCGGAGAGGTGTAAAACAATACCATTTACCGCTAACCAAAATGGATGTGAAAAAGGCGAAGAACTGAGTTGCTGGGAAAGTACCAAGGGCGACACCCAATGGAAATTTCTGCCTTTCAAAGAAGATAACGACCTTCGCAAACAAATTCGACAACAAGAACTCCCCGGAACTCAAACAAATGCAACTTATCACCGTATTTTAAATGGTCTTTACGAATTGCATTTTGGTAACAATTTGAATAACGTCACTCTGCATGACTGGCTCCAACGCGATTTAATGTCAGCTACATTGTGTGTGTGGATTAGAACAAAGCGACCAGGCCTGCAGCTCACGTACAAGCGGAAAATGGAGTGTGACGGGAGAATTAAAATTCAACTACTCTTTGAAGACGCCTTGCTCAGGACTACAGTACATGGAAATGAATGGAATATACCAGCCTGTTTAGTTGACGACAAATGGCATCATGTCTGTGTAAGCTGGCGATCAAAAGATGGACTTCTACGAATCTACATCGATGGAGAAAGTAAACATGATGAGTTGGAAAGTTCAATTTTTGGTCTGTCAATGACAGGAGGAGGGGAACTGGATCTAGGATTCACCAATGGAACTCCACGAATCAGTGAACTTAACGTCTGGGATCACGTGATAGAATCAAAAGAGATAAGGCGCATGTCTCTTGGCTGCGCAAATGAAAGAGGAACTGCAGAATCTTGGACAAACTTAATAAGTGCAACTTTATTGCAGTACTCCGCAATTTTGAATCAAGAGGATTTATCTTGCCAAGATCGAGAAGGTAACCGTCTCGTCCTCAATATCACCTCAACCAATAAAACTACTCTTCAAGAACGACTTATGAGCCCGTGGTTTAACCGGTCAGCTGCTGGGCATGGCAAGTGTGTAAAGTTTCGCTTTATGTTCGCTGGTCACGGAGCTCGTTCGTTACATTTTGTTCAGAAAACGTTCAAGGATTTGGCGCCAACACCGATTTGGGCGGGAAACAGAATTGGAAATGTCGACAGTTTGTGGCAATATGGACAGGTGTCAATTACGGGAACAAAAAGTCATCAGTTGGTGTTTGAGGGAAAACTAGACTCGAAGCACGCCGGCTACATAGCGGTTGGAGGTCTGTACGTTACGCCTGGTTACTGTGCAATACAACCACCGAATGCATACAGAGGGTGCAATATCACCAGGAAAGGTATAAAATCTGGTTCAATTTTGACGCCTCAATATCCCGGATATTACACGAATAATGCACGCTGTCAATGGCACCTGACGGTTCCTCGTGGTCATGTGATCAGACTGGAGTTCCTGTATTTTGACCTGGAGTACCACCCGCGGTGTTCAAATGACTATGTTGAAGTGCGTGACGGTTTGTCCAAGTCCTCGTCTCTGATTGGCAGATTTTGCGGTCATACCATCCCAACTTCAATGGAGTCTTCCGGCAGAGGATTGTCGATAATCTTTGCGTCAAATGACAGAGTGATGGGAGGAGGCTTCAAGGCTTGGTACCGCGCAAGACGAGTTCAAGACAACTGCCGCTTCCAAAAAGGTTGTCCTCGTTGTTGCACGTGTTTCCAGACAGCAGATAATTTACTATTCGGAATAGAGAGCAAAGACAACGACAGATTAGAAGTAGTTCCAAAGAAGATTCCGAGCCGTACCTCAATTGTGTTGTTCAAAGGAAACAGTATAAGCAGTCTACACTATCATGACTTTCAGCCTATGACGTTAAAACAGTTGCTTCAATATATCGATCTCAGTCAAAATCTGATATTCAACATTGACAGGAGTGTGTTTCACAACATGTCTTCTTTGAAAACACTAAGATTGAATGGGAATTTTATTCGAGATATCTCTCCTGGGACTTTAGCTGGACTTCGTTTTCTACGCACTTTAGATTTGGGCGATAACCTGCTGTCTAAAGTACGTGGTGACACATTTGGAGACCTGGACAATCTTCATATACTAAGTCTTCGCGCCAATGTTATAACTTCAATTGAAGGAGCAACTTTTAGCAAGACAAGCCAATTGACACACTTGTACCTTCAAGAAAACAGAATTTCTCACATCGAGGATGGCCTATTTCAAGCTTTAAAGCAGTTGAAAGTTCTATATCTGAAGAACAACAATTTAAAAACATTCACTTCACTAACATTCCAAGGACTTCAAAATCTTAGAATCATGCACTTGCAATACAACTCGCTTATGGAATCTACAATTTCTCAAGGAGTATTCAAAGACCTCACAGATTTACGAGAATTAGAAATCGACAAATTTATCCTTTGCTGCTATGCCCAGAAAGCCATCAAAGACTTGGAGTGCCGTAGTGTTGACCAAAACAAATTCTCCAGCTGCGAAGACATGATGAAATACCCAGAAATCCGTGCGTGCCTCTGGCTGCTGGGAATCCTGGCCTTTTGTGGCAACTTATCTGCCCTTATTTGGCGCGCAGTGGTGCCTGACGACAATCGTGTCCAGTCCATACTCCTCTCCAACTTGGCGATGGCGGATTTCCTCATGGGTATTTATTTGCTGATACTCGCCGTACTGGACACCATGTGGAAAGGAGAATACTTCGAGCACGATGTGTCGTGGCGCAACAGTCTCGCTTGTCAGTTTGCGGGAGCGATTTCTATGCTATCCAGTGAAGTTTCTGTTGTTATGTTAACTGCCACAACAGCAGACAGATTGATATGCGTGGTTTTTGCTCTCAGATGTAAAAGACTAACAGTTAAATCCGCGTACATCGTTTGCCTGTGTGTTTGGGTGGTTGGAATTGTTATATCAGTACTACCAATTATAGGAATCGAGTACTTCCACGACACATCGAGCGAGATCAGCTTCTTTTCACGATCGGCCGTTTGTCTGCCTCTTCAGTTGTCCCGCGAGAAACCCGCGGGTTGGGAGTACGCGGTAGCGATTTTCATAATCCTAAACTTCTGTTCGTTTGTTTTCATTCTCGTTGCATACATCGCTATTTACTGGACTATGGTGAAACTTGCTGGCTCCTCAGCATCCAGACACATGCAGCAAGAGTCCGCGAGAGTCAATCGCCTGTTCGTCATCGTGTTGACAGATTTCTGTTGCTGGATGCCAGTTATAATTATGAGTATCTTGTCTCTAACTGGAAACTTTGACGATCTCCAAGGTTTGGTTTACGTGTGGGTTGCCGTGTTTGTTCTTCCTCTGAATTCATCAGTGAACCCAATCTTGTACACCCTCTCTACTTCGCGCGCCAAATCTCAGTTTAGAACCATCTGTTCAACGATTTTTATTTGGAGGAAATCAAGAAACCCCTTGAAGAAGAAAACCAGGATCCAAGACGATTCAACTCGCAACATTAGTCCATTATCTTTTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P46023	G-protein coupled receptor GRL101 OS=Lymnaea stagnalis OX=6523 PE=2 SV=1
Q91ZZ5	Relaxin receptor 2 OS=Mus musculus OX=10090 GN=Rxfp2 PE=2 SV=2
Q5XM32	Relaxin receptor 2 OS=Canis lupus familiaris OX=9615 GN=RXFP2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000149 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF00431 all species →	CUB	CUB domain	Domain	Interproscan
PF13385 all species →	Laminin_G_3	Concanavalin A-like lectin/glucanases superfamily	Domain	Interproscan
PF00629 all species →	MAM	MAM domain, meprin/A5/mu	Domain	Interproscan
PF00057 all species →	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036055 all species →	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR030476 all species →	Conserved_site	Pentaxin, conserved site	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR002172 all species →	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR000998 all species →	Domain	MAM domain	Interproscan
IPR001759 all species →	Family	Pentraxin-related	Interproscan
IPR000859 all species →	Domain	CUB domain	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR002131 all species →	Family	Glycoprotein hormone receptor family	Interproscan
IPR023415 all species →	Conserved_site	Low-density lipoprotein (LDL) receptor class A, conserved site	Interproscan
IPR035914 all species →	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24372 all species →	GLYCOPROTEIN HORMONE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007189 all species →	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007190 all species →	Biological Process	activation of adenylate cyclase activity	Interproscan
GO:0008528 all species →	Molecular Function	G protein-coupled peptide receptor activity	Interproscan
GO:0009755 all species →	Biological Process	hormone-mediated signaling pathway	Interproscan
GO:0016500 all species →	Molecular Function	protein-hormone receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04307	RXFP2, LGR8; relaxin family peptide receptor 2	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.