Detailed information of KAJ7384174.1 in Desmophyllum pertusum

Genomic Location: MU825890.1:971422...972348
NR annotation: KAJ7384174.1, Cleavage polyadenylation factor subunit clp1 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7RG82Protein CLP1 homolog OS=Nematostella vectensis OX=45351 GN=v1g236308 PE=3 SV=1
A2VE01Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Bos taurus OX=9913 GN=CLP1 PE=2 SV=1
Q92989Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Homo sapiens OX=9606 GN=CLP1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004210 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06807
all species →		Clp1Pre-mRNA cleavage complex II protein Clp1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038238
all species →		Homologous_superfamilyClp1, C-terminal domain superfamilyInterproscan
IPR045116
all species →		FamilyPolyribonucleotide 5-hydroxyl-kinase Clp1/Grc3Interproscan
IPR010655
all species →		DomainPre-mRNA cleavage complex subunit Clp1, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12755
all species →		CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1PInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006378
all species →		Biological Processobsolete mRNA polyadenylationInterproscan
GO:0006388
all species →		Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0051731
all species →		Molecular Functionpolynucleotide 5'-hydroxyl-kinase activityInterproscan
GO:0031124
all species →		Biological ProcessmRNA 3'-end processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7384174.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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