Detailed information of KAJ7384968.1 in Desmophyllum pertusum

Genomic Location: MU825883.1:739576...746342
NR annotation: KAJ7384968.1, Nucleolar protein 9 [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A3LXG0Nucleolar protein 9 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=NOP9 PE=3 SV=1
Q6BRH3Nucleolar protein 9 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=NOP9 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006296 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00806
all species →		PUFPumilio-family RNA binding repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040000
all species →		FamilyNucleolar protein 9Interproscan
IPR001313
all species →		RepeatPumilio RNA-binding repeatInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13102
all species →		NUCLEOLAR PROTEIN 9Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000056
all species →		Biological Processribosomal small subunit export from nucleusInterproscan
GO:0000447
all species →		Biological Processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000472
all species →		Biological Processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000480
all species →		Biological Processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0030686
all species →		Cellular Component90S preribosomeInterproscan
GO:0030688
all species →		Cellular Componentpreribosome, small subunit precursorInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7384968.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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