Gene detail

Detailed information of KAJ7385036.1 in Desmophyllum pertusum

Genomic Location: MU825883.1:1713857...1724352
NR annotation: KAJ7385036.1, CD40 signaling pathway [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q924T7	E3 ubiquitin-protein ligase RNF31 OS=Mus musculus OX=10090 GN=Rnf31 PE=1 SV=2
Q96EP0	E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens OX=9606 GN=RNF31 PE=1 SV=1
Q8IPJ3	E3 ubiquitin-protein ligase lubel OS=Drosophila melanogaster OX=7227 GN=LUBEL PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003221 (this species only)
Ubiquitin family	E3\|E3 activity\|RBR · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01485 all species →	IBR	IBR domain, a half RING-finger domain	Domain	Interproscan
PF18091 all species →	E3_UbLigase_RBR	E3 Ubiquitin Ligase RBR C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002867 all species →	Domain	IBR domain	Interproscan
IPR047540 all species →	Domain	E3 ubiquitin-protein ligase RNF31-like, BRcat domain	Interproscan
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR041031 all species →	Domain	RNF31, C-terminal	Interproscan
IPR044066 all species →	Domain	TRIAD supradomain	Interproscan
IPR026254 all species →	Family	E3 ubiquitin-protein ligase RNF31-like	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR047542 all species →	Domain	E3 ubiquitin-protein ligase RNF31-like, Rcat domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16004 all species →	RING FINGER PROTEIN 31-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0036435 all species →	Molecular Function	K48-linked polyubiquitin modification-dependent protein binding	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0070530 all species →	Molecular Function	K63-linked polyubiquitin modification-dependent protein binding	Interproscan
GO:0071797 all species →	Cellular Component	LUBAC complex	Interproscan
GO:0097039 all species →	Biological Process	protein linear polyubiquitination	Interproscan
GO:1990450 all species →	Molecular Function	linear polyubiquitin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7385036.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.