Detailed information of KAJ7385088.1 in Desmophyllum pertusum

Genomic Location: MU825882.1:302026...303072
NR annotation: KAJ7385088.1, PAB-dependent poly(A)-specific ribonuclease subunit 3 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q58A45PAN2-PAN3 deadenylation complex subunit PAN3 OS=Homo sapiens OX=9606 GN=PAN3 PE=1 SV=3
Q640Q5PAN2-PAN3 deadenylation complex subunit Pan3 OS=Mus musculus OX=10090 GN=Pan3 PE=1 SV=4
A1L1C7PAN2-PAN3 deadenylation complex subunit pan3 OS=Xenopus tropicalis OX=8364 GN=pan3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005429 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18101
all species →
Pan3_PKPan3 Pseudokinase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR030844
all species →
FamilyPAN2-PAN3 deadenylation complex subunit PAN3Interproscan
IPR041332
all species →
DomainPan3 pseudokinase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12272
all species →
DEADENYLATION COMPLEX SUBUNIT PAN3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000289
all species →
Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932
all species →
Cellular ComponentP-bodyInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0006397
all species →
Biological ProcessmRNA processingInterproscan
GO:0008143
all species →
Molecular Functionpoly(A) bindingInterproscan
GO:0031251
all species →
Cellular ComponentPAN complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7385088.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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