Genomic Location: MU825879.1:151945...160106
NR annotation: KAJ7385657.1, regulation of intralumenal vesicle formation [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families
| CDS |
| KAJ7385657.1 |
| Protein |
| KAJ7385657.1 |
| UniProt accession | Description |
|---|---|
| Q9WVS6 | E3 ubiquitin-protein ligase parkin OS=Mus musculus OX=10090 GN=Prkn PE=1 SV=1 |
| Q9JK66 | E3 ubiquitin-protein ligase parkin OS=Rattus norvegicus OX=10116 GN=Prkn PE=1 SV=1 |
| O60260 | E3 ubiquitin-protein ligase parkin OS=Homo sapiens OX=9606 GN=PRKN PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002539 (this species only) |
| Ubiquitin family | ULD|UBL|NEDD8 · all ubiquitin genes in this species |
| Ubiquitin family | ULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00240 all species → | ubiquitin | Ubiquitin family | Domain | Interproscan |
| PF17978 all species → | zf-RING_14 | RING/Ubox like zinc-binding domain | Domain | Interproscan |
| PF17976 all species → | zf-RING_12 | RING/Ubox like zinc-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003977 all species → | Family | E3 ubiquitin-protein ligase parkin | Interproscan |
| IPR000626 all species → | Domain | Ubiquitin-like domain | Interproscan |
| IPR041170 all species → | Domain | RING/Ubox-like zinc-binding domain | Interproscan |
| IPR047535 all species → | Domain | E3 ubiquitin-protein ligase parkin, RING finger, HC subclass | Interproscan |
| IPR029071 all species → | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR041565 all species → | Domain | Parkin, RING/Ubox like zinc-binding domain | Interproscan |
| IPR015496 all species → | Family | Ubiquilin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10677 all species → | UBIQUILIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004842 all species → | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0006511 all species → | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0031593 all species → | Molecular Function | polyubiquitin modification-dependent protein binding | Interproscan |
KAJ7385657.1.
