Gene detail

Detailed information of KAJ7385973.1 in Desmophyllum pertusum

Genomic Location: MU825878.1:792207...823841
NR annotation: KAJ7385973.1, hypothetical protein OS493_012305 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7385973.1

ATGGCGATTGAAAAGCAGATTTTCTCCTTTATTCTAGCCATTACGTTCTCTTATTTTAATCTGATACGTTGTGAAGTTACAGAAGTTAATCTGGGAGGCACCTGGATCGTTACAAATGCAAATAAAAGCATTTCTGTGCATGGAAATGTTCCCGGAAATGTCCACACAGCTCTGTACGAGAATGGGACTATTATGGACCCTTACTTCCGGTTTAATGATGTCAAATATCGGTGGATAGCTTATGACAACTGGACATACACACGGTCTTTAGAAGTTCCTGAAGATGTCACATCAAAAAGACAGATTCTCCTGGTATTCGAAGGGCTGGATACAATTGCTGCAATTCTGGTGAACAGTATCAAAGTTGGCGAGTCGACAAACATGTTCCACAGGTATATCTTCAATGTTAAGGGTGCTCTCAAGACTGGTTTGAACAGTGTACAGTCCCAGTGCAGCGTGGCGAGTGTCATAGCAACTTCATCAGAAAAAGAGCAATGTTCATTCAGTTGGGATTGGGGACCTGCCTTTGTTCCTCAAGGGATTTGGCGGAATGTCTCTCTGCAAGCTTATGATTCAGCTGTTATAAGGGACATCACAATAACACCCACTAAAGGATCTATTAATATTACGTGGCAGTTATCAGTGACAGCTTTCATAGATGCGGCTGAAGATGGCGTGACTGGGACCCTACTTCTCAGCCTTCCTCAGATGTCTCGCTCACAGAAACTTCCCATTAAATTGCGGCAAGGCCTACAGAAAGTTTCTCTGCCGGTCATGTCTTTTACTGGGAAAGATGATGTAAAACTTTGGTGGCCTCGAGGATATGGAAAGCCTTATCTATACACTGTCAAGGTGGTCTTTGTGAGCCCCTCAGGTCAAGAACAATCAAGCATTAGTCGTAACATGGGTTTCAGGAAAGTCAATCTTGTACAGGAACCAATAAAGGGTGCTCCAGGTCTGGGATTTCACTTTGAGGTGAATGATTTACCAATATTTCTTAAAGGGGCCAATTGGATTCCAGCAGATGCCTTTGAGGACCGTGTAACAAGCTCAGTTCTTAGGAATCTTCTCCAGTCCGCTGTGGATGCGAACATGAATGTCGTGAGGAACTGGGGAGGAGGAATCTATCAACATGACGAGTTCTACAATATAGCGGATGAATTAGGGTTACTTGTATGGGAGGAATTTATGTTCGCTTGCGCCATGTACCCAACAGATGAAGAATTCTTGAACTCGGTCAAAGAAGAAGTACGATATCAGGTGTCCGGACGTCTTCATCATCACCCGTCAATCATATTGTGGAGTGGCAACAATGAAAACGAAGCAGCGCTGGCTGAAAACTGGTACAACACGAGTTCCATGTTTAATAGGTACGCCAACGATTATGTCAAACTCTACATAGACACTATACGAAAGACCCTGGAGGAAGAAGATAAAAGTCGACCTTTCCTCTCCTCATCACCTTCGAATGGAGTAGATACGGAGAGGGAGGGGTGGGTAGCCAAAAAACCAGGAAGCCCCTACTGGGGAGATGTGCACTTCTACAACTATACGATGGATTGTTGGAATAGGACTGGACCTTACAACAGCGCGTTCATGGATCATCGGCAACATCACGGAGACGGTAATGAGCAAATGTTGGATCAAACCAAGAAACACTTTAAACTGTCCAACTCATCGGATTCTTTAAAGAAATTCAAGGACACTCTCTTTATTATCCAGGTGACTCAAGCTCAATGCATGAAGACAGAAACTGAACATTACAGACGTTTACAGAGTGAATTAGTACAGGGTCAAGGAAGAACCATGGGTACAATCTACTGGCAGTTGAACAGTATCTGGCAGGCTCCGACGTGGTCCTCGTTAGAATATGGAGGCCAATGGAAGATGCTTCATTATTTTGTGAAGGATTTCTTTGCTCCAGTGATAGCGTCATCGTACCAGGAGGGCGGCAAGTTTAAACTTTACGTGGTGTCTGATCTTATGAAGCCAATCACAGAAGGTGCAGTGTCCCTTAAGGCGTGGTCATGGTCTTCATTCACACCGCTCTACAGCAGAAACATCGCATTTGACATTGATTCGACAGTCCTCGGTGAGTGGAAACTCGTATACGCAGAGGATTTACAAGCTCTTGTACAAACAAGCAGATGTGAAAGTGCTCGACATTGTGTGTTTACTATGAAACCTTTGGACCAGAGCAGTGGAAAAGACCTGGGACCGACAAACGTGTTCTATCCTTCCAGCTTATCAGAAGCAGTGGGTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O00462	Beta-mannosidase OS=Homo sapiens OX=9606 GN=MANBA PE=1 SV=3
Q8K2I4	Beta-mannosidase OS=Mus musculus OX=10090 GN=Manba PE=1 SV=1
Q4FZV0	Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003914 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00703 all species →	Glyco_hydro_2	Glycosyl hydrolases family 2	Domain	Interproscan
PF02836 all species →	Glyco_hydro_2_C	Glycosyl hydrolases family 2, TIM barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050887 all species →	Family	Beta-mannosidase glycosyl hydrolases	Interproscan
IPR006102 all species →	Domain	Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich	Interproscan
IPR036156 all species →	Homologous_superfamily	Beta-Galactosidase/glucuronidase domain superfamily	Interproscan
IPR006103 all species →	Domain	Glycoside hydrolase family 2, catalytic domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43730 all species →	BETA-MANNOSIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004567 all species →	Molecular Function	beta-mannosidase activity	Interproscan
GO:0006516 all species →	Biological Process	glycoprotein catabolic process	Interproscan
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01192	E3.2.1.25, MANBA, manB; beta-mannosidase	EC:3.2.1.25	Lysosome	ko04142	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.