Gene detail

Detailed information of KAJ7386028.1 in Desmophyllum pertusum

Genomic Location: MU825878.1:1335777...1341726
NR annotation: KAJ7386028.1, hypothetical protein OS493_012361 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7386028.1

ATGATGTCATCTTCTACCAAACGACTCGTGGAAGCTTGCCGTAAAGGCATGAACGGAGATGAACAAGCACTCGACGACCTAGGCCTGCTTGATTCCACCTTCCCGCCAAGCAGAGGAGTCATCAACTGTTCTGCTGGCGCTTTACAGCGAAGCTACCAACGCGCTTTGTTTACAGCAGTAGCCGCCAAAAAGCTTTCCATGGCCTTTCTTGAGCAGCAAAGCCGAGATTTAATGGACCACATCGTGGCCGTGGCATCATTCAAAGATATCAGGCTCGAGCATTCGGTTGACAGTCAAGACGTCGCGGAAATCATGCTGGCGCTCCTCCATGAAGAGGAACATCGAATCAATGCCGCGGCTGACAAAGAAGAGGAAGAAGAGGATGACAACAAAGACGCGAGTGACCATCAAGCTGCGACCAACCTTCAAGCTACAGATGATGAACCAAAGGAAGATCAAGCCGCGCCCAGCCTTCAAGCCTCACATGAAACAAAGGAAGATCAAGCCGCGACCAACCGTCAAGCCGATCAACCGACCAACCAATCAGCGGGCTATCATCAAGCCACTGAGCAAGAAGAGCCGGAAAAAGAGCCTCAGGACACAAGGGATGAGTACGCAAAGCATCACAACAAGAGACGCCAATGCCCCTTGTGTGATTTCTTTGGAACGCACCTTCGCCGCCACGTCTCGACCAAACATCCAGACAGGTGCATCAATAATAACGATGTGACCAGGCAAGTGGCCATCGCCGACAAAAGGCTTGCCGATCGGGGAAGCAAAGGAATAGTGCCAATCACAAAGAATAAGAACGAATACCTCTACCAGTGCTGTTACAAGGACTGTTCGGCGATAGTGACAAGGATGGGCCAGCATTTATCCAAGGCCCATAAGCTCACCGACCAAGAGAAAGTGAAGGCCGCCAAAGCCAAGTTCATCCGGCTCAACATTGCGAAGACACGAAAGTTGGGAGTAGGAGCTACCCAGGCACCGTCGAAGAAACGTGAGCCCTCGCAAGCATCTCTGTTAAAAAAGCAGCCATCTTCCAAGAAACGTGAGCCTTCACAAGCTTCTCTGTTGAATCAGCCACCTTCCAAGAAAAGCAAACCTGCAGCAAAAGCGGAAGCAAAACGAGCTGCTAAAAAAACACAAGAAGAAGATGTGGAAAGCGAGGAATCGTCGGAAACAGATGCAACAGACGAAATCTACAATTCAGAAGGCGATTCGGATGACGACGTTGTAAGCGACCATGGGGAGCTGAAGGTCTTAGCAGACCTTGACGACATGTCAGACTTCGCAGACAGTGATGAGGAGGAAGAGGAAGAAGATGAAATAGAAGGACTGACATGGAAGGAGTGGTACGAGGGAAAGGACCGTCAACGGAATGTCCATAAAGTCATCAACGCTTTGGATGCCGAGGGTGACGACCTGACGTGTCTAATAAGAAACCAGTGCATGGACATCTGGGAACACTTTTGCGCTCCACGTCTTCGAAAGAAAGTTATCACTGGCAACACAATCAAGACTTACCTGAGAAGTCTTGAAATCTTCGCGAAATTCGTGGAGAAAGGATTGATATACAATCCTGAATTGATATCAACTAGTCAGAAGCAATTGCTAATCAGCCTCCAAACTCGGCTGCCGGACTACAAGAAGGCGATCCATCGACGAACGGCACATGAAACAACAACCAGGGACGTGGACGAATCTTACACCGCTTTGGAGCCAAAAGATCTTCGAGAACTCGAAAACTCAGAGTTGGCCAAGACTGCAATCAAATTGATTGGATTGTCCATCGAAAACCATGTCTTGACAAGATCTGAATTCACGACAGTCAGGGATTTCTTGATCGTCACAACCCTATATGAGAATGCATCGCGTCCTGGCCCATTAGAGAACGCCAAGCTGAAGCGCTTCCACCAGGCCGTGTACACTCCAGAAAAAAAGAGATATACCATTCTGGTTGACGAACATAAAACAACACGGCACCAAGGACCTGCTGAGTTGACTGTCGACGAGCGGCTCTATGGTTACCTGAAGATCTACGTCGACTACATCCGTCCAGCTTTTGTGGCCTCCGGGATTGAGGAAGCGCTCTTTATCAAAGACGATGGGCAGCCGTTTAACAAAGGTACGATTGGGAGGAGAGTTAGCGAGTTTTTCAAACGGGCGGGTGTCCGCGACGACATTCGCGTCTCATCAACGAAGGTGCGAAAGCTCTTTTCTGGAGAGGCTTTTAATTTGACGCCAACCAAGAAACGGATGGTGAATTCTCACATGAAGCATCGAGAGACCACAGCAGACAAGAACTACGTGCTGAAGGTAAATGCAAAACGTTCTGCCACAGCTCATGAGATAATGAGGGATCTCATTAGAGAAAACAACAGCAGAGAACCAGAAGGAGATAAGCCAACCAAAGCCAGCCCTGAGCCTGAAAGCAAAGCCAGCCCTGAGCCTAAAAGCAAAGCCAGCCCTGAGCCTAAAAGCAAAGCCAGCCCTGAGCCTAACCCTAACCCTAATACCAAAGCCCTCATTCAAGAGCAACAGGACGAATCTGAGGAGGACTCTGAACCTGCTGAGGACGCCACATCAGCCCTCAGCAACGACGACAGGGTGGTGGTGGCAAGCGTATTTACGGACACCATCAACGCGGGCAAGCACCTCTCACTTTCTGAAATCAGAGATAAAATGCGAACTGCTATCTATCTCAGAAAGTTTGTGATTAACCAACGGAAAGTGAAAAAAATCTATGATTTTGTCCGTTACAAAACCAGCGTAGCAATCCAGACAACAAAAATTCAAGTAACTGATCCGTACGATTTCGATGGAGTAAAGAGTTTGCCTTCTTCATCTTTAATACGCAAGCAATGGCGTGAAGATGATGTAAAGTGCATAAACCAGCGTTTCAAACATCTAGAAAGCATGCCTTCCAAGAGCCGAACTATCTCGATGTTCAACAATGATGAAGTGCTGCAACATATCCTTCAAAGAGAAGGAAAAGAACGCTGCTACGAAAAGACCATCATGAGCAAACGGAGGATGCCTTATACCCCCCATGAGGACAAAGACATCATAGATTATGTCCGAGATACTCCACAGCATCCTCCTAGGGGGAATATTCTGTGGCAGTTGGTCGAGAACGAGGGGTTGACTAATCACACCTGGCAATCAATGCGCTCGCATTACCTTGATAAGTTAATCCCCTCTTCTCGGCCAACTGCGGCCAAAAAGAGGAAAATGGCATCCTCGAAATCCACATCTCCCTCGTCCACCATCACCACCCAATCATCCACACCCATGACATCATACCTCGACTTCCTCATGTCAGGTGGGGAAAGAACCACCCCATTCACTACAGCATCCACATCCGCCACTGCACACACATATCCATCCACATCCACCATCACCACACCCACTTATCCATCCACATCCACCATCACCACACACGCATCCACACCGACCATCACCACACCCACTTATCCATCCACATCCACCATCACCACACACGCATCCACACCCACTATCACAACACCGACTTATCCATCCACATCCACCATCGCCACACAACCATCCACACCCACAATCACCGCACACAGCATTTCATTCACTCGCACATTTTCACTTATCATGGACTTCACTTTACCCGCAGGCACCGTTCGTTCACAACATTCCATGTCATTCACCACCATTTACTCATTTGATCCATAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000713 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08914 all species →	Myb_DNA-bind_2	Rap1 Myb domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR039595 all species →	Family	TE2IP/Rap1	Interproscan
IPR015010 all species →	Domain	Rap1 Myb domain	Interproscan
IPR011010 all species →	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR013762 all species →	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16466 all species →	TELOMERE REPEAT-BINDING FACTOR 2-INTERACTING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000723 all species →	Biological Process	telomere maintenance	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0010833 all species →	Biological Process	telomere maintenance via telomere lengthening	Interproscan
GO:0042162 all species →	Molecular Function	telomeric DNA binding	Interproscan
GO:0070187 all species →	Cellular Component	shelterin complex	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006310 all species →	Biological Process	DNA recombination	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7386028.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.