Gene detail

Detailed information of KAJ7386553.1 in Desmophyllum pertusum

Genomic Location: MU825876.1:3057679...3082502
NR annotation: KAJ7386553.1, Cytoplasmic dynein 1 heavy chain 1 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7386553.1

ATGGTTGCTTGTTTCGAAGTGTTCACAACTTGGGATGATGAATATGAAAAGCTTCAAACCTTGTTGCGAGACATTGTGAAGAAGAAGAGAGAAGAGAGCCTGAAGATGGTGTGGCGAGTAAATCCAGCTCACAAACGACTTCAAGCAAGGCTTGACCAGATGAGAAAATTTCGCCGACAGCATGAACAACTGCGAGCTGTAATTGTCCGTGTTCTCCAGCCCCCTGCTGTTAGCCAAGCATCTCCGCCCAGCCCTGGTGGCCCTCCCAAGACTGTTGAGGATGAGGAGACGAAGCCAGAAGCACTGCTTGATCCAGCTGATGCTAATGCTATACAGGAAGTAAACCTTGCTTATGAGAATGTTAAGGAAGTTGATGGACTTGATGTGTCAAAAGATGGATCTGAGGCATGGGAGGCAGCCATAAAGAGGTACGATGAGCGCATAGACAGAGTGGAGACGCGTATCACAGCACGTTTACGAGACCAGCTGGGTACAGCCAAGAATGCAAACGAGATGTTCAGGATCTTCTCCAGGTTCAATGCTCTGTTTGTACGTCCGCACATCAGAGGTGCGATCCGCGAATACCAGACTCAGCTGATTCAGAGGGTGAAAGATGACATTGAGGCACTTCATGACAAGTTTAAGATCCAGTATCCCTACAGTAAAGCCTGCAAGATGAGTAAAGTTAGAGATTTGCCTCCTGTTTCTGGCTCCATTATTTGGGCAAGACAGATTGACCGTCAGCTATCTGCTTACATGCGGCGTGTGGAAGATGTTCTTGGTAAAGGCTGGGAAAACCATGTTGAGGGACAGAGGCTGAAGGCAGATGGCGACAGCTTCAGGCAGAAACTCAACACTCAGGAACTGTTTGATGAATGGTCGAGAAAGGTACAACAGCGGAATCTTGGAGTTTCTGGACGAATCTTCACCATTGAAAGCACAAGAGCCCGAGGAGGTGGAAGAGGAAATGTGTTGAAACTAAAAGTGAATTTCTTGCCAGAAATCATCACACTCTCCAAAGAGGTTCGTAACTTGAAGTGGTTGGGTTTCCGAGTTCCACTGGCGATTGTAAACAAGGCACACCAGGCCAACCAGCTTTACCCGTTTGCCATCTCACTTATTGAAAGTGTGCGAACTTATGAAAGGACTTGTGAAAAGGTTGAAGAGAAGAGCTCTATCTCACCTCTCGTCGCTGGCCTGCGCAAAGAAGTACAAGCTCTCGTAACTGAAGGTATGGTTCTTGTTTGGGAGTCCTACAAGTTGGATCCTTATGTGCAGAAATTAGCTGAGGCTGTGTTCAATTTCCAAGAAAAGGTCGATGACTTGCTGAGCAGTGTTGAGAAGATCGACATTGAAGTGCGCTCCCTTGAGACTTGTGCCTACAACAGCCAGACATTCAGAGATGTTCTTGGTAAAGTTCAGAGAGCCGTGGATGAGTTGAACCTCCACTCCTACTCTAACCTTCCTCAGTGGGTTTCAACTCTTGATGTTCAGGTTGAAAAGTATTTGTCGGGTCGTCTGGAGGCTGGTTTAAAGAGCTGGACTGAATGTCTGAAAGGAAGCAAGTCCTCCAGACACGTGGACGATACAGACACTTCCATGATGGCACACAAACCAGGAGGAGATCCTGACATACAGATTCTAAGGCATGAGATCCTTATTCAGAATCAAGTGCTGTTCATACAGCCTCCTGTGGAAAGAGTGCGAGAACACTTGATTGCAGAGTTACATATATGGGTTGGGAACATCACTCTACTGCCCCGCATCCAGAGTTCTCGATACCAGGTTGGCCTGGAGCGCGATGAGCTAGAGACTGACACAACTTATCGCAGCCTCCTGGGAAAACTTCCTGAAGGCCCAGTCTACCTACAGGGTTCTTACGCCGCAATTGAAGAAAAAGTGGCTAAGATGGAAGAGTATGTACAGGTGTGGCTTCAGTACCAGTCCCTCTGGGACATGGACATGAGCATGGTGTACAACAGACTGGGAGAAAACATGGATAAATGGATGGTGCTACTCAAAGACATCAAGCGGGCACGCGTAACCTTTGACACTTCAGAAACGCAGAAAGTCTTTGGGCCTGTTGTCATAGACTACCATCAGGTTCAATCTAAAGTCAACATGAAGTACGACACTTGGCACAAAGAAATTCTCAGCAAGTTTGCTTCTCGCCTTGGTGATAACATGCAAGACTTCTATGGCTCAGTCTCAAAGGCCCGTACAGATATGGAGCAGCAGACAATTGAAGGAGCATCAACAACGGATGCTGTTGGGTTCATCACTGTTGTGCAGACACTCAAGAGAAAGCTGAAGAACTGGGAGAAGAGTGTCGAGATGTACAAGGAAGGACAACGCATCTTGGAACGACAGAGATTTGCCTTCCCTCCGTCATGGCTGTATGTAGACAACATTGAAGGAGAGTGGGGTGCATTTAATGACATTCTGAAGAGGAAGGACTCCAGCATTCAGACACAGGTTGCCACTCTGCAGATGAAGATCATTTCTGAAGACCAAGCAGTGGAAACACGTAGCTCGGAGTTACTCTTTGAATGGGAGAAAGGCAAACCAGTTCAGGGTAGCACCAGACCTGACGTCGCACTGAACAACTTGGCTATCTTTGAGGGCAAATTCTCCAGACTAAAGGAAGACAGGGACAATGTCGCCAGGGCTAAAGAAGCTCTTGAACTGATGGAACCAGGTACACTGGTAGCCAGTGACGAGAGAGTACAGATTGGGTTAGAAGAGCTGCAAGACTTGAAGGGTGTGTGGTCAGAACTGGCAAAGATCTGGGAGAAAGTGGACGAGTTGAAAGAGAAGCCATGGCTTTCTGTCCAGCCTAGGAAGCTTCGTCAGTCACTAGATGCTTTGTTGAATGACATGAAGAACCTTCCAGCTCGGCTCAAACAGTATTCCTCTTTTGAGTATGTTCAGAAAACCATCAAGACCTACCTGAAGGTGAACATGCTGATTGTTGAACTCAAATCAGAAGCATTAAAGGAAAGGCACTGGAAGACGCTGATGAGAAAGTTGCATGTCAACTGGGTGCTGAGTGATCTAAACTTGGGACAAGTGTGGGATGTAGACCTGCAGAAGAATGAGATGATTGTCAAAGACGTTATTCTTGTTGCCCAGGGAGAAATGGCTTTGGAAGAATTCTTGAAACAGGTGCGAGATGTGTGGCAGAGCTATGAACTGGAGTTGGTGAACTACCAGAACAAATGCCGTATCATCCGTGGCTGGGACGACCTGTTTACCAAAGTCAAGGAGCACATCAACAGTGTATCAGCCATGAAGCTCTCACCTTACTACAAGGTCTTTGAAGAGGATGCCCTACAGTGGGAGGAAAAGTTGAACCGCATCCATGATGTGTTTGATGCTCTGCTACCAGTAGAGACGCAACGATTCTCGAGCATCAGCACAGAATTCCTGACACTAATGAAGAAAGTTGCCAAAACTCCGCTGGTCGTGGATGTCCTGAACATCCAAGGTGTACAACGACAGCTGGAACGTCTCGCTGATCTTCTTGGTAAAATCCAGAAAGCCTTGGGTGAATACCTAGAGAGGGAGAGAGCATCTTTTCCAAGATTCTACTTTGTGGGAGACGAAGACTTGCTCGAGATCATCGGTAACAGCAAGAGCCTTCCAAAGCTACAGAAGCACTTCAAGAAGATGTTCGCTGGAGTGGCTGCCATTGTTTTCAATGATGAGGAAAATTTGATAACTGGTTTGAGTTCCAAGGAAGGAGAAGAGGTGGTCTTCAAGAAACCTGTGTCATTAAAGGAACATCCTAAAGTGAATGAATGGCTGACATGTACCGAGTCTGAGATGCGCACCACTCTAGCTACATTACTGGCTGAGGCAGTGAATGATGTACAGCAATTCAATTCCGATACCGTTGATGGGCAGCAGTACATGAAGTGGGTTGATGGATACAATGGCCAACTTGTGGTTCTAGCTTCTCAGATTGCATGGTCAGAAAGCTGCGAAAATGCACTGCAGACAATCTCCTCATCTTCCAACCAGAAAGACCTGGAACCGATGTTGAAGGTTCTTAAAGTTGTTGAAGCAACACTGAACATCCTGGCTGACTCTGTGCTGCAAGAACAGCCTCCCGTGAGACGACGCAAACTGGAGCACTTGATCATTGAACATGTCCATCAGCGTGATGTGACACGGGAGCTGATTAGCACAAAGGTGACAAACACAAAAGCTTTTGAGTGGCTCAGCCAGATGAGATTCTACTTTGACCCAAAACAGAAAGATGTTCTTCAACAACTTTCAATCCACATGGCCAATGCTAAGTTTAACTATGGATTTGAGTACCTTGGAGTTCAGGACAAGCTGGTCCAGACCCCCCTGACAGATCGCTGCTATCTTACCATGACTCAGGCTTTGGAGGGAAGATTAGGAGGGTCACCCTTTGGTCCTGCCGGCACAGGGAAGACAGAATCAGTTAAAGCTCTTGGTCATCAGCTGGGACGATTTGTGTTGGTCTTTAATTGTGATGAGACGTTTGACTTCCAGGCTATGGGACGTATCTTTGTAGGTCTCTGTCAGACTATTCAGCTGTCGCTCAGAGAAGGCAGCAATGATACAACCACACCCATTAGTATTGAGCTGGTTGGCAAGCAAGTGAGAGTGAGTCGTGACATGGCAATCTTCATCACAATGAATCCCGGCTATGCTGGACGTTCCAACCTCCCAGACAATTTGAAGAAGTTGTTCCGTAGCTTGGCCATGACTACCCCCGACAGGCAGCTCATTGCACAGGTCATGTTGTACTCGCAGGGCTTCAGGACTGCAGAGAAACTTGCAACCAAGATTGTTCCATTCTTCAACGCTGGTAATGTGAAGCGTGACAAGATCCAGCGAATCAAAGAGAGTCTGACTGAAGATGGCCAAGAGGCTGATGAAGCAGCCATTTCTGAGAATCTTAATGAACAAGAGATTTTGATCCAGAGTGTTTATGAGACAGTGGTTCCAAAGCTTGTCGCAGAAGACATCCCTCTCCTTCAGAGCTTGCTGTCTGATGTCTTCCCAGGAGTGCGTTATATTGGTGCAGAGATGAAGAGTCTCAAGGCAGAGATAAAGAAAGTGTGCACAGAAATGAACCTTGTGTATGGAGACGGAGAAGAGCAAGGGAGTGCATGGGTGGACAAGATCCTTCAGTTGTACCAGATCTCTCAGATTCATCATGGCTTGATGATGGTTGGACCTAGTGGCAGCGGCAAATCCTCAGCTTGGCGTACACTACTGAAAGCCTTAGAAAATTTGGAGGGTGTCGAGGGTGTGGCACATGTTGTTGATCCTAAGGCCATTTCCAAGGAAGCATTGTATGGAACACTTGATCCTAACACAAGAGAATGGACTGATGGATTGTTTACACACATACTGAGAAAGATCATTGACAATGTGCGAGGGGAGATCAACAAGAGACAGTGGATCATTTTCGATGGCGATGTTGATCCAGAGTGGGTGGAGAACTTAAACAGTGTTCTAGATGACAACAAGCTCTTAACTTTGCCGAATGGTGAACGTCTAGGCATTCCACCCAATGTGCGCATCATGTTTGAAGTGCAGGATCTACGCTTTGCAACTTGGCCACTGTCAGCCGTTGTGGCATGGTGTGGTTCAGCGAGGATGTCCTGTCAACTGAGATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JHU4	Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2
Q14204	Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens OX=9606 GN=DYNC1H1 PE=1 SV=5
P38650	Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002025 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08393 all species →	DHC_N2	Dynein heavy chain, N-terminal region 2	Family	Interproscan
PF12774 all species →	AAA_6	Hydrolytic ATP binding site of dynein motor region	Domain	Interproscan
PF08385 all species →	DHC_N1	Dynein heavy chain, N-terminal region 1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043157 all species →	Homologous_superfamily	Dynein heavy chain, AAA1 domain, small subdomain	Interproscan
IPR026983 all species →	Family	Dynein heavy chain	Interproscan
IPR013602 all species →	Domain	Dynein heavy chain, linker	Interproscan
IPR035699 all species →	Domain	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR042222 all species →	Homologous_superfamily	Dynein heavy chain, domain 2, N-terminal	Interproscan
IPR013594 all species →	Domain	Dynein heavy chain, tail	Interproscan
IPR042228 all species →	Homologous_superfamily	Dynein heavy chain, linker, subdomain 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46532 all species →	MALE FERTILITY FACTOR KL5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005858 all species →	Cellular Component	axonemal dynein complex	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0030286 all species →	Cellular Component	dynein complex	Interproscan
GO:0045505 all species →	Molecular Function	dynein intermediate chain binding	Interproscan
GO:0051959 all species →	Molecular Function	dynein light intermediate chain binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10408	DNAH; dynein axonemal heavy chain	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.