Detailed information of KAJ7387116.1 in Desmophyllum pertusum

Genomic Location: MU825874.1:2097850...2111108
NR annotation: KAJ7387116.1, Mediator of RNA polymerase II transcription subunit 16 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q566H4Mediator of RNA polymerase II transcription subunit 16 OS=Xenopus laevis OX=8355 GN=med16 PE=2 SV=1
Q08D69Mediator of RNA polymerase II transcription subunit 16 OS=Xenopus tropicalis OX=8364 GN=med16 PE=2 SV=1
Q9Y2X0Mediator of RNA polymerase II transcription subunit 16 OS=Homo sapiens OX=9606 GN=MED16 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004885 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20718
all species →
Med16_bridgeMediator complex subunit 16, central helical bridgeDomainInterproscan
PF11635
all species →
Med16_NMediator complex subunit 16, N-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048338
all species →
FamilyMediator complex, subunit Med16Interproscan
IPR048616
all species →
DomainMediator of RNA polymerase II transcription subunit 16 , central helical bridgeInterproscan
IPR021665
all species →
DomainMediator complex, subunit Med16, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13224
all species →
THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016592
all species →
Cellular Componentmediator complexInterproscan
GO:0045893
all species →
Biological Processpositive regulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7387116.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP