Detailed information of KAJ7387157.1 in Desmophyllum pertusum

Genomic Location: MU825874.1:2570417...2578382
NR annotation: KAJ7387157.1, transcription corepressor binding [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SPL2PHD finger protein 12 OS=Mus musculus OX=10090 GN=Phf12 PE=1 SV=1
Q96QT6PHD finger protein 12 OS=Homo sapiens OX=9606 GN=PHF12 PE=1 SV=2
Q09698Uncharacterized protein C2F7.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC2F7.07c PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005166 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628
all species →		PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46309
all species →		PHD FINGER PROTEIN 12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003714
all species →		Molecular Functiontranscription corepressor activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0070822
all species →		Cellular ComponentSin3-type complexInterproscan
GO:0140110
all species →		Molecular Functiontranscription regulator activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K26244PHF12, RCO1; transcriptional regulatory protein PHF12/RCO1-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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