Detailed information of KAJ7387180.1 in Desmophyllum pertusum

Genomic Location: MU825874.1:2773284...2783321
NR annotation: KAJ7387180.1, hypothetical protein OS493_004147 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9AST1Transcription initiation factor TFIID subunit 15 OS=Arabidopsis thaliana OX=3702 GN=TAF15 PE=1 SV=1
Q27294RNA-binding protein cabeza OS=Drosophila melanogaster OX=7227 GN=caz PE=2 SV=2
Q28009RNA-binding protein FUS OS=Bos taurus OX=9913 GN=FUS PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003922 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR034870
all species →
FamilyTAF15/EWS/TLS familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23238
all species →
RNA BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0003712
all species →
Molecular Functiontranscription coregulator activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7387180.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP