Detailed information of KAJ7387435.1 in Desmophyllum pertusum

Genomic Location: MU825874.1:6461468...6467041
NR annotation: KAJ7387435.1, hypothetical protein OS493_004432 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8WPW2Pyridoxal 5'-phosphate synthase subunit SNZERR OS=Suberites domuncula OX=55567 GN=SNZERR PE=2 SV=2
A5UY94Pyridoxal 5'-phosphate synthase subunit PdxS OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=pdxS PE=3 SV=1
Q5SKD9Pyridoxal 5'-phosphate synthase subunit PdxS OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=pdxS PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006083 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01680
all species →		SOR_SNZSOR/SNZ familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001852
all species →		FamilyPyridoxal 5'-phosphate synthase subunit PdxS/SNZInterproscan
IPR033755
all species →		DomainPdxS/SNZ N-terminal domainInterproscan
IPR011060
all species →		Homologous_superfamilyRibulose-phosphate binding barrelInterproscan
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31829
all species →		PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNZ1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0042819
all species →		Biological Processvitamin B6 biosynthetic processInterproscan
GO:0042823
all species →		Biological Processpyridoxal phosphate biosynthetic processInterproscan
GO:0006520
all species →		Biological Processamino acid metabolic processInterproscan
GO:0008615
all species →		Biological Processpyridoxine biosynthetic processInterproscan
GO:0016843
all species →		Molecular Functionamine-lyase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06215pdxS, pdx1; pyridoxal 5'-phosphate synthase pdxS subunitEC:4.3.3.6
Vitamin B6 metabolismko00750deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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