Detailed information of KAJ7388032.1 in Desmophyllum pertusum

Genomic Location: MU825726.1:2987...7701
NR annotation: KAJ7388032.1, Pre-mRNA-processing-splicing factor 8 [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P2Q9Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens OX=9606 GN=PRPF8 PE=1 SV=2
Q99PV0Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2
Q9SSD2Pre-mRNA-processing-splicing factor 8A OS=Arabidopsis thaliana OX=3702 GN=PRP8A PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004404 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12134
all species →		PRP8_domainIVPRP8 domain IV coreDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043173
all species →		Homologous_superfamilyPrp8 RNase domain IV, fingers regionInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR021983
all species →		DomainPRP8 domain IV coreInterproscan
IPR043172
all species →		Homologous_superfamilyPrp8 RNase domain IV, palm regionInterproscan
IPR027652
all species →		FamilyPre-mRNA-processing-splicing factor 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11140
all species →		PRE-MRNA SPLICING FACTOR PRP8Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000244
all species →		Biological Processspliceosomal tri-snRNP complex assemblyInterproscan
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005681
all species →		Cellular Componentspliceosomal complexInterproscan
GO:0005682
all species →		Cellular ComponentU5 snRNPInterproscan
GO:0017070
all species →		Molecular FunctionU6 snRNA bindingInterproscan
GO:0030619
all species →		Molecular FunctionU1 snRNA bindingInterproscan
GO:0030620
all species →		Molecular FunctionU2 snRNA bindingInterproscan
GO:0030623
all species →		Molecular FunctionU5 snRNA bindingInterproscan
GO:0071013
all species →		Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0097157
all species →		Molecular Functionpre-mRNA intronic bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7388032.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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