Gene detail

Detailed information of KAJ7388509.1 in Desmophyllum pertusum

Genomic Location: MU825463.1:39417...60878
NR annotation: KAJ7388509.1, hypothetical protein OS493_037129 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAJ7388509.1

ATGGCACGTTTGCGGATGCCGATTGCGTGGTTTGTAGTTATTCTGGCTTTCCTTTGCTCATCGCAAGACTTTGCAGATGCTACTCAGTATAGTCTCATCAAGGATCCTCACCCTGGTCAGTTTCTATTTATTCCAAATGGATACTCAATAGATCTAAACTGTCAATTAAATGACCCATTAGCTGATGTGACCCTACTGCAGAAGAAAGAGACTGAATCATACAAAGAACATACAAGGATTCCAGATGGAGTCAAAGTTACACTGAGTGGACAAATATTTACTATAAACAATATGGAAGATTCTGATAGAGGACCATATTTTTGTAAAGTTCAATCAACAGTATTAACAATAGATTACCTTTTAAATTATGAATCAACACAAGAAGTTACTGCATCACAAACTGGTGCATTTGAGTGCCGAACTGATGTACCCTCATGGGGCTGGGGCTACAAAGGAAAAACAGGAATGCTCTTGGTTACAGAATTTCAGTTTGTTGCAAAGAATAAGAGACCATATCAGATACTATTTGTGGGAAACAGCTCAGTGATCAATTGCAGGACCAATGACCAAAAACATCATCCTCTAGTTTATGGTGTAGCACAAGATGACACTGGTCTCTACATATGTAAAGCCACTTTGCCAAGCATAAACAAGACTATTGAAGAGGTCACCAGTCTGTTGGTCTTCACAGGTGACAACAGAAATCCACAAGCCCAAGTGTACCCATTTGCTAAAGAAGTCCTCCATGGACAGGACTTTAACTTTTCCTGTCTGGTTCCTGGTGATGGCATGTCTATGCAATGGTTAAAAAATGGCATAGCTGTTCCAAGTGATCAAACGCAGAGACAACCAAACAGAATAGTAAAAGGACATACCTTTAATGAAAACCTTCTGATGTTAAGAAAAGTTTCCAGGGTAGATGATGGCAATTATACTTGTGTAGTTACGACTTCTCAACAGCAAGGATATTCCAACAAGGTCACGGCAAGGTTATCAGTTAAAGAGTGTCATAATCCCAGTGGAAAGTTTGCTGACACAACCGATGCTTATGGCTACTTTGAATGCATACAAGGGACTGCTGTGAAGAGAGATTGCCCTGACAGGCAATATTGGAACCAGGAGGAAAAGAGATGCGAGTTAACACTAAACTTCCAGCATAGTGTTTATGTTGAAACCCTTCCTTCGTGTTCCCGTGGTCCGCTGGATATAACTGATTCCATTCAAATCGACTGCCATGTATTACATTTTGGAAAAGTCAAATGGTTCAAGAAAGATACATCTTCAAAAGTGCCCCAGGAAATAACAGATTCAAGAGTGACAATATATCCATCAATACGTCTCAGAAGGAGCCACAGGGAAAAAACCAGCACTTTGATGCTTCGTGATGTAACACGAAGTGATGCGGGAACTTATGTTTGTTGGAAGAGCAATGGATACAATGTTACAGCAAATGTTACTGTGTTCATCGATGTAGCAGAACCTTCGCCTGCCAATATATCCACCTTAAGTCCACCGCAATATGTAAAGGAGGGTTCAGATGCCAGATTTCTCTGCACTGTAAGTGGCTCACCGCGTCCCACCGTGACATGGCTGAAGGGAAAAGAAACCATCGCCGTGTGCGAAGGAAAGCAAAAATACTGTGCGATCATAGCACCGACCAGATACAAATCACGTTGGTTCGATGAAAGGGATTGCATGAAGCCACACTCGAGTGGACCGACCAGTGGTAGATGGTCGAGTTCTCTGAAGGTTTTCAAGAGTCAGTATCCGGGTGATGCTGTAGACTACACTTGTGTAGTTGACAATGGCTTGGGTCAACCAGAGGAACAGGTTACAACACTTAAGATCATTGTTAAGCCTGTGTTGGTCAAAGAATCCAACACTGGAATGGAAAAGCCCACTGTCGTTGAAAACCAAACCGAAGAGTTGGAGTGCAAAACCAAACGTAGCTATCCCCCGGCTATCTTCAGTTGGCGATACCAGCCATTGCAATGTAAAGATTATTCAGACTCTTCAACGTGCACGTCAGTCAAATCCAAAAAATGGAGGAAAGTCGATTTGGCAATTGGGAAGATAGAAAGTCGTTCTCCCACAACCAGTGTTCTCATAGTACCAGCGAACATAGACAGAAGGTACTTCAAGTGCTCTGCAGTAAACCGTGTCAAAAGAAGGATGAATGATTCCATAGTGTACCAGTTTATCCGAAGAGGTAAGTAA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00047	ig	Immunoglobulin domain	Domain	Interproscan
PF13895	Ig_2	Immunoglobulin domain	Domain	Interproscan
PF01607	CBM_14	Chitin binding Peritrophin-A domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR002557	Domain	Chitin binding domain	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan
IPR036508	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR013151	Domain	Immunoglobulin	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0008061	Molecular Function	chitin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07600	DSC1; desmocollin 1	-	Cell adhesion molecules	ko04515	deepkoala