Gene detail

Detailed information of KAJ7388610.1 in Desmophyllum pertusum

Genomic Location: MU825459.1:88700...107067
NR annotation: KAJ7388610.1, Hemicentin-1 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7388610.1

ATGGTAATTGGAGCAAATGGAACCTATGGAGTGTCTGTACTAAGACAGTCAGTGGTATACAAACAAGGACGAGAGAATGCACTAATCCAGAGCCAGCATATGGTGGAAAACGCTTGTAATGAAACCAGAGCAGTAGTAAGGGAGTGTAGCAACATGTCTAGCTGCCATGACGTTCCTGTACGCTTAAATGGTGCAGATATAGAATATGGTGGAAGAGTGGAAGTATTTTACAAGGGAAAATGGGGAAAGATCTGCCGTAATGAATGGGATTTCAATGATGTAAAAGTTATTTGCCGTCAACTTGGCTTCAAAGGCGCGCTGGCTGAATTCATTGGGTCGGATGTCAAGGATGAGGGACATCCTTTCGTAATGTCTGGTGTAACCTGCACTGGAGATGAGTCTGAACTGGCATCCTGTGCACGCATTGATGGAAAGCTTAATATTGACTGTCAAAACGATGACGAAGGTGCTCAGTATTGTGCGAACCAAGTAAAGAATAAAGAAGTCTTGGAAAAGAAACAATTAGAATTTAACATCGACGCCAGCGAAACAGTTAGCTGCTCCATTCAAAACAAAACCAATTTCATTAAATGGTTTGTTAACAACAAAGAAGTCAATTCTACATCCGGGACGAGGATTAGGGTGACAGAAAATGGAAAATTGTTCATAGACAAAGTTCAGTTGTCTGATGGAGGAATTTATGAATGCAGGAGATTAGAATATGCAAAGTACTACACCATCTACATTAATGCGAGATTTTCGGAGAAGGCTCCTAAACAAAGTCTTATTGTTGACACATCTGGGATTATAAACTGTAGTGCTGAGGGAACGCCAAGCCCACTGATTAGTTGGAACAAACAAGATGGAGTACTGATGTACAAGCCAAAGGGCAGATTCAGACAATTTTCTAATGGGAGTTTGCATGTTGATCCAGTTCACCCCGGAGACAATGGAACATATATCTGTACAATGAAACAATATAAAGGAACTGACAGGGTCACAAGCACGCCTCAAACCATAAAAGTTTCTGTTATAATTCCTCCAAATGTTCAGTTGTTGGGACCAAACAAGCCCATACGAGAAGGAGACAGTGTCAACCTGACATGTAAAATTAACAAAGGTTTTCCTAAACCACAAATATCCTGGTCTAAAGATGGCACAGAGCGTAAAGAAAAGAGTACAACTTTGATCTTAACAGGGGTAAAAGATGAAGACGAGGGAATGTACACCTGTAAAGCAGAAAATGCCGGTGGTGCTTTCAGACACAGCTATAGCAAATATGTTACTGTTGATGTTCCACCTAAAGTGAATCCTGAACTCAGGAATCGTTCTGTTGAATTGAACTCCACGTTGACAATGACATGCTTTGTGAGAGGTGCTCCACTACCAAAAGTCAACTGGACTAAGAATGGAGTGGGTCTTGGTAACAACAATAACACATTCACTATTGAGCATGTGACATTCAAGCACGCAGGCTTGTATGGGTGTGCAGCTGTAAACCGGGTGGGAAAAACTCACACCACGTTTTGGATTAACATAACAGTCTCTCCTCAGGTTTATGTGTCTCCGAGAAACCAATCTGTTCCGGAAGGCTACCCAACCAACTTTACTTGCAAAGCCACCGGTATTCCAAAGCCGACATTGTCCTGGAATTTTAATGATGGGGACCTCCCATCGGGTGTCAGTCAAAGCGATACTAAGGAAGGATCATTCCTGGAGTTGTTAAACACAACTAAAAGTATGGAAGGGACATACAAGTGTACAGCGAAAAACAAAGCGAATGCGACAACTTCCTCTGCAATTCTTCGTGTTTTTGAAAACCCCACTGCTAAAATTAGTCCAAATCCATATCCAACACTTACGGTAGGAGATGAGCTCAGATTAACATGCAAAGTCAATGAAGCAACACTGGAGATCAAATGGAAGAAAAATAGTGACCCAATAAGCCACAGAGCACGCATTGATACACGAGTAGATGAAAAATGGAGCAATTTTTTTATTGAGGAAGTTGTGGGAGGGGATAGTGGTAAATATTCTTGCGAAGCACGTAACAAACCAGGCATTGTGGCCCACTCTACTGTGAAGATCGATGTCAAGGATTCTAATGCCAGGCCGGCTGTTGAGTGGTATTACATTGTTGGACCCATGTCTGCTTGCATTGTCATATTTTTGGTTGGTTGGTACATTCGTAAACGTCAAAGGGCAGCCATGCCCAAATTCCCTAGTAAAGAGCAAGACATTGAGATGGAGCTGCTCAATGTAGAAGTGGATGAATGGGAGATTGCATTTGACCGTATACTACTTCAAGAGGTCATTGGCAGAGGGGCATTTGGAGCAGTCTGGAGAGCACTGTTGAGTCAACCAGATGGAAAACCTGGAAATTGCACAGTTGCTGCGAAATGTTTTACACCCACTTCTGGAGAAGATGGAAGAAAATCTCTGACGAGAGAAATTGAGCTTGGAAAACTTCTTGGAGAAAATCCTCAGCCAAACATTTTCATCCGATACTGGTCATGGAATACTTGGCATGCGGTGACTTGCTGGTTATCTGAGAAAAGCCGAGGAATTCACGATAAGTATCATCTCGGACAGGGGAGTGTTCAAAAGCTGGAAACATATGACCTTGTGTTGTTTGCCAAACAAATCGCTGCTGGCATGGTGTACCTTGGATCAAGAGGGGTTAGTGAACATGTCCCAAAAATTACACTACGACAAAATTCCTTCAAAAACTCCAACTTTCCAAATTCAATCCGAATTCTTCATGTGGGTCACTGCGGATGTTTTACTTACACATTGTTTTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96RW7	Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
Q8NDA2	Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
D3YXG0	Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000305 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00530 all species →	SRCR	Scavenger receptor cysteine-rich domain	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR001190 all species →	Domain	SRCR domain	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR050831 all species →	Family	Carcinoembryonic antigen-related cell adhesion	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR017448 all species →	Domain	SRCR-like domain	Interproscan
IPR036772 all species →	Homologous_superfamily	SRCR-like domain superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44427 all species →	CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7388610.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.