Gene detail

Detailed information of KAJ7388793.1 in Desmophyllum pertusum

Genomic Location: MU825450.1:154292...161870
NR annotation: KAJ7388793.1, DNA-directed RNA polymerase III subunit RPC3 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9BUI4	DNA-directed RNA polymerase III subunit RPC3 OS=Homo sapiens OX=9606 GN=POLR3C PE=1 SV=1
Q9D483	DNA-directed RNA polymerase III subunit RPC3 OS=Mus musculus OX=10090 GN=Polr3c PE=1 SV=1
Q5XIL3	DNA-directed RNA polymerase III subunit RPC3 OS=Rattus norvegicus OX=10116 GN=Polr3c PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005794 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05645 all species →	RNA_pol_Rpc82	RNA polymerase III subunit RPC82	Family	Interproscan
PF08221 all species →	HTH_9	RNA polymerase III subunit RPC82 helix-turn-helix domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008806 all species →	Domain	RNA polymerase III Rpc82, C -terminal	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR039748 all species →	Family	DNA-directed RNA polymerase III subunit RPC3	Interproscan
IPR013197 all species →	Domain	RNA polymerase III subunit RPC82-related, helix-turn-helix	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12949 all species →	RNA POLYMERASE III DNA DIRECTED -RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0005666 all species →	Cellular Component	RNA polymerase III complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7388793.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.