Gene detail

Detailed information of KAJ7389322.1 in Desmophyllum pertusum

Genomic Location: MU825435.1:179298...183456
NR annotation: KAJ7389322.1, hypothetical protein OS493_032176 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7389322.1

ATGAGCACTCTAAGCGCCCGTCAGCTTGGGATGTGGCAGAGGATTCTTCTAAGTGTAGCATTTTGTCAAACACTAGTTATTCAGTGTGGATCAGCTACGGATTTAGATGGACCCCGAGATACTTACGAGGGCGACGACTGCTTAAAACGGGTTAAGGAGTTGCCCGCATTCAGGCCGGATACCACTTTTACGCCAAAAGATGAAAGAGAGGTTTTGTTGGACATCTACGCATCCACAAATGGACAACAGTGGTTCAATACCAGCGGATGGATGAATTCACCGAAAGAAACATCTCACTGTTCATGGTATGGTATCACCTGCCACAATAACACATCATATATCAAAGCTGTTGTATTGGCGTACAACAATTTGGACGGGCGTCTTCCTTCGAATCTTTGGAAAATACGCAACTTATTGTCCTTGTGTACTCCTGGCAACCCAAGACTGCGGGGCCGCATTGGCGACTTTTTGTTTGGAAATATGAGCAAACTACTGACAGTCGTGTTCAATGCAGCCTCTATTGCTGGAAATATTCCTGAAGATCTCGCTCAACTGAGAAGTCTCCAAAACTTCCAGGGCTGTAACATGGACGGCGAAGGCTTCACTGGCCGTTTACCAGAAGACATAGGAAACATGACAGAGCTAAGAGCACTGTGTCTCGGAGGAAATAGCCTAACTGGACAAATACCTAGAAGCATTTCCAGATTAAAGAAGCTTTGGTGGCTTGACCTAACAAACAATCCTGGCATGATGCATGGAAACCTAAGTGACATATTTGAGATTCCCTCGTTATCCCGCTTAGTCATATCTGGGGTTAAATTAATAGGACAGATGCCTCGTGTTATGCCAGGATCATTAAAAACCCTTGTTTTACCTGGAAACATGATTTCGGGAACGTTCTCGGAAACATTTACGGAAGAAAGCAACCTGAAAATGCTAAACATGGCCAATAATCAGCTGACAGGAGATATCCCAGGTAAATTGCTTCTTTTACCAAACATTACCACCATCAATTTATCGCAGAACCTGTTTTCTTCAATTAACAAAGGGAAGGCTTGGCCACATTTTATCACGGCGGCGGCTAAATTATACGTTTCTTTGGCGGGAAATCGGAATTTGTCAATACATTTTTCAAGCTTCATGAACCTTTTTACAAGAAGAGTTGACTCTGTAGTTCTCAGTCCAACAATTTTAAATATAAGTTTTTGCGACATAAAAAGTCCTGTACTTGGAGTAACGTTTTTCTTGAATAGACTATCCACTTGTGATTTACGTGGAAACAGGTTTTATGGTGTGATACCCAATATTCGTTCCGACACCTCAATTCTAACCTATTTTGATCTTTCCTCAAATAATTTGTCGGGTGGTCTTCCAGTAGGATTTCAAAATCTCGTCTACCTACAATATTTTGATATTTCTGGAAATCCTTCCATGCGAAAAAGAACTACTGCAACGTCCGGTGTCTTCCGTCCAGACTTTTCAAGAATGGTTAGACCACCTCAAGGAGACAACTTTACTTGTCCTGAAGGACGACTTACATTCAACAATGGCTGCATTCGCTTGGATCCGACATTTTACGAATACAGACATTGCATCTGCGATGCAGATTTTTACGGAGAGATCGGATTGTGCAAGAAATGCATGGACGGTGGGACGTGTATTCAACCAACTGTCACTTGGTCAGAAGATATCCGCCCAAACATCGTGAAGATACACACTGGCTATTGGCCATCACCTCATCCTCAAAACGCCACCCATCTTGTGAAGTGTCCAGTGTCATCTGCATGTAATCCATCAAATTCCTGCACCTGTCGCCTCGACACAACACAACAAGACACAAACTGCACCCGTTACAGACCATCAGTGTCATCTCTGATTACCACATGCAACCTATCCTGTATCTGTCATCCTGGAAACACAGACAGATTTTGCTCTCGTTGTAAAGACCGATTTTACAAAATTGGTGGACTGTGCTTCCGATGTACAAAAGGCGACCTAACTTATTATTATTTGTTTATTCCTATCTTTGCTGTGTCTTTTGTTGTTTTACTTTGGTCATATTTTCATTTTAAACTGCGACCTATCAAATGGTTTGCTGTTACGGCGGTTCATTTTCTCTTGATGTTAATCTTTATGTTGTTGGAATTGCTACCCGCCTGGGTTTTCAAATTGAATCTGGTGGTTTTTTGTGTTGTGTATGACCAGTCGAAGTAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000824 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00560 all species →	LRR_1	Leucine Rich Repeat	Repeat	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF08263 all species →	LRRNT_2	Leucine rich repeat N-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR013210 all species →	Domain	Leucine-rich repeat-containing N-terminal, plant-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45974 all species →	RECEPTOR-LIKE PROTEIN 55	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06838	SLIT1; slit 1	-	Glycosaminoglycan binding proteins	ko00536	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.