Gene detail

Detailed information of KAJ7389557.1 in Desmophyllum pertusum

Genomic Location: MU825429.1:312983...324718
NR annotation: KAJ7389557.1, TNF receptor-associated protein 1, mitochondrial [Desmophyllum pertusum]
Species abbreviation DPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7389557.1

ATGATTGTATGTTCTTGTATATCAGCTACAGGATTGAAAGATTTCCAAGTAAGAAGCTACCCAAATATTTGCTGTAGAGCTTTGTCAGAAAATTCCACTGATAAGGAGCATTTATCCAAGAATGTGGATGAATGTGAAGAGGAAGATGACACTGTACATATTATTGCTGAAAATGAAAAAGTTGTTGGTGAATCACAAAGGCACGAGTTTCAGGCAGAAACAACACAGTTATTGAACATTGTAGCCAAGACGCTCTACTCAGAGAAAGAGGTTTTTATTCGTGAAGTGATCTCCAATGCTTCTGATGCTCTGGAAAAGCTGCAGTATCAGTTCATGACAGGAAAGGATGTTGCAGAAAATGAACTTCCTCTAGAAATCCACATTGCCACGGATCAAGAGAAAGGAACTCTGACAGTTAAGGATCATGGGATAGGAATGACAAGAGATGAGTTGTTAGATAACCTGGGTACTATAGCTAGATCAGGTTCTAAAGCTTTCCTTGATGAGCTCAGCGAAATAGGGCAAGGAGATGCACGGGAGAAAAGTATTATTGGACAGTTTGGCGTGGGCTTCTATTCTTCATTCATGGTGGCTGATAGAGTTGATGTGTACACACGTTCTTTTTCACCTGGCAGTAAAGGATTTATGTGGACTTCAGATGGGTCTGGCTCATTTGAGATTGCAGAGGCAGAGAATGTATCTCGGGGAACAAAGGTGGTCATGCACTTAAAGGAAGACTACAAGAATTTTTCCATCAAAACTACAGTTGAAGATACTATCAAGAAATACAGTAACTTTGTTGGCTTTCCAATATACCTGGATGGCACATGCATTAATACAATTCAGCCATTGTGGATGTTGGATCCCAAGGATATAAGCACTGAAGAACATGAGGAGTTTTACCAGTTTATTGGCAAGACATATGACAAGCCAAGATACACTCTTCACTACAAGACAGATGCGCCATTGAATATCCGAAGTATATTTTACATTCCTGAAACTCTTCCTCAGTTATTCACTGTTCAGCACATGGAGCATGGTGTGTCACTTTACAGTAGGAAAGTTCTTATTCAATCCAAAGCTCACAAAGTTTTACCAAACTGGCTGCGGTTTGTCAAGGGAGTTGTGGACAGCGAGGATATTCCACTTAACCTTAGTCGTGAACTTCTTCAAGACAGTGCCCTTATTAACAAGCTCAGTGATGTGTTGTCAGCTAGAATTGTCAAGTTTCTTCAACAACAACAAAAGAAGGATAGAGTTAAATATGAAAAATTCTTCAAGGATTGTGGCACCTTCTTCCGTGAAGGAATAGTAAGCACTAACAGTGACGAAATGAAACAAGAAATAGCAAAACTTCTGCTATTTGAATCATCTCACGAAAAGGCTGGAGTTCTGTCATCACTCCCTGTATATACATCACGCATGAAACCAACTCAAAAAAATATCTATTACTTGTGTGCTCCAAGTCGTGAAGTTGCAGAGACATCTCCATACTATGAAGCCCTGAAGAAAGATGATGTAGAGGTTTTGTTCACATATAATGAACAAGATGATATAACCCTACATTACCTCAGTAAGTTTGAAGGGAAGAGTATCATGGCTGCGGAGAATTACTTTTCAGTTGATAGAGAAGTCAAATCAGCTGAGTCAGTAGAAGAAACTCAAGCAGACCAATCATCAGACTCTCTTACTGAGGAGGAAGCAAAAGAATTAGTAGACTGGATGAGTATAATCCTTGGAAAACAGAAAGTCTCACTTGTAAAGGTATCCAAACATCTGAGTCAGACCAGTCATCCAGTGATGGTGACTGTAGCAGACATGGTGGCAGCTAAACACTGGCTCAAAGTTATGAGAGCTGAACAATACCAGGACATTGACAATGCCAAGTATCAGATATTTCAGCCAACACTGGAAATAAACCCAGGTACATACATAATCCACTACCTGTCTTCATTAATATTAAGCTTGGGTATAAACAGTCGTCAGAGCTTTATGATTGTTGACATTTTGAAGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q12931	Heat shock protein 75 kDa, mitochondrial OS=Homo sapiens OX=9606 GN=TRAP1 PE=1 SV=3
Q9CQN1	Heat shock protein 75 kDa, mitochondrial OS=Mus musculus OX=10090 GN=Trap1 PE=1 SV=1
Q5XHZ0	Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004497 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00183 all species →	HSP90	Hsp90 protein	Family	Interproscan
PF13589 all species →	HATPase_c_3	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR020575 all species →	Domain	Heat shock protein Hsp90, N-terminal	Interproscan
IPR001404 all species →	Family	Heat shock protein Hsp90 family	Interproscan
IPR036890 all species →	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR037196 all species →	Homologous_superfamily	HSP90, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11528 all species →	HEAT SHOCK PROTEIN 90 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0140662 all species →	Molecular Function	ATP-dependent protein folding chaperone	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0019901 all species →	Molecular Function	protein kinase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7389557.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.