Gene detail

Detailed information of KAJ7389966.1 in Desmophyllum pertusum

Genomic Location: MU825422.1:209567...220400
NR annotation: KAJ7389966.1, Putative electron transfer flavoprotein subunit [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9DA19	Corepressor interacting with RBPJ 1 OS=Mus musculus OX=10090 GN=Cir1 PE=1 SV=2
Q5U2T8	Corepressor interacting with RBPJ 1 OS=Rattus norvegicus OX=10116 GN=Cir1 PE=1 SV=1
Q86X95	Corepressor interacting with RBPJ 1 OS=Homo sapiens OX=9606 GN=CIR1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007268 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10197 all species →	Cir_N	N-terminal domain of CBF1 interacting co-repressor CIR	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019339 all species →	Domain	CBF1-interacting co-repressor CIR, N-terminal domain	Interproscan
IPR040014 all species →	Family	Corepressor interacting with RBPJ 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13151 all species →	CBF1 INTERACTING COREPRESSOR CIR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06066	CIR; CBF1 interacting corepressor	-	Epstein-Barr virus infection	ko05169	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.