Detailed information of KAJ7390035.1 in Desmophyllum pertusum

Genomic Location: MU825421.1:261368...269745
NR annotation: KAJ7390035.1, hypothetical protein OS493_027560 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2RRU4Sterol regulatory element-binding protein cleavage-activating protein OS=Rattus norvegicus OX=10116 GN=Scap PE=2 SV=1
Q6GQT6Sterol regulatory element-binding protein cleavage-activating protein OS=Mus musculus OX=10090 GN=Scap PE=1 SV=1
P97260Sterol regulatory element-binding protein cleavage-activating protein OS=Cricetulus griseus OX=10029 GN=SCAP PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004100 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →
WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019775
all species →
Conserved_siteWD40 repeat, conserved siteInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR030225
all species →
FamilySterol regulatory element-binding protein cleavage-activating proteinInterproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46378
all species →
STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000139
all species →
Cellular ComponentGolgi membraneInterproscan
GO:0005789
all species →
Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0032933
all species →
Biological ProcessSREBP signaling pathwayInterproscan
GO:0032934
all species →
Molecular Functionsterol bindingInterproscan
GO:0032936
all species →
Cellular ComponentSREBP-SCAP complexInterproscan
GO:0045540
all species →
Biological Processregulation of cholesterol biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7390035.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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