Genomic Location: MU825419.1:584087...588479
NR annotation: KAJ7390198.1, Guanine nucleotide-binding protein subunit alpha-12 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families
| CDS |
| KAJ7390198.1 |
| Protein |
| KAJ7390198.1 |
| UniProt accession | Description |
|---|---|
| P27600 | Guanine nucleotide-binding protein subunit alpha-12 OS=Mus musculus OX=10090 GN=Gna12 PE=1 SV=3 |
| Q14344 | Guanine nucleotide-binding protein subunit alpha-13 OS=Homo sapiens OX=9606 GN=GNA13 PE=1 SV=2 |
| Q03113 | Guanine nucleotide-binding protein subunit alpha-12 OS=Homo sapiens OX=9606 GN=GNA12 PE=1 SV=4 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000664 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00503 all species → | G-alpha | G-protein alpha subunit | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR001019 all species → | Family | Guanine nucleotide binding protein (G-protein), alpha subunit | Interproscan |
| IPR011025 all species → | Homologous_superfamily | G protein alpha subunit, helical insertion | Interproscan |
| IPR000469 all species → | Family | G-protein alpha subunit, group 12/13 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10218 all species → | GTP-BINDING PROTEIN ALPHA SUBUNIT | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003924 all species → | Molecular Function | GTPase activity | Interproscan |
| GO:0007186 all species → | Biological Process | G protein-coupled receptor signaling pathway | Interproscan |
| GO:0019001 all species → | Molecular Function | guanyl nucleotide binding | Interproscan |
| GO:0031683 all species → | Molecular Function | G-protein beta/gamma-subunit complex binding | Interproscan |
| GO:0007165 all species → | Biological Process | signal transduction | Interproscan |
| GO:0001664 all species → | Molecular Function | G protein-coupled receptor binding | Interproscan |
| GO:0005834 all species → | Cellular Component | heterotrimeric G-protein complex | Interproscan |
| GO:0007188 all species → | Biological Process | adenylate cyclase-modulating G protein-coupled receptor signaling pathway | Interproscan |
| GO:0007266 all species → | Biological Process | Rho protein signal transduction | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K04346 | GNA12; guanine nucleotide-binding protein subunit alpha-12 | - | GTP-binding proteins | ko04031 | deepkoala |
Genes whose expression across the transcriptome samples of Desmophyllum pertusum tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Desmophyllum pertusum, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
