Gene detail

Detailed information of KAJ7390306.1 in Desmophyllum pertusum

Genomic Location: MU825418.1:796229...806953
NR annotation: KAJ7390306.1, Peroxisome biosynthesis protein pex1 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7390306.1

ATGAATCGGGTCAGATCAGCTTGTGTAAAGACAAACTCATCGAAAACCTGCTTTGTTAGTCTTTCTGAAGACCTCGCAGAGGCGATAGGACTACGAATTCAGGGTCAACCTTTTGCTCTTCAACTGCAGTGGTCAGATAGCAAGGCCTTTACCAGCTGGTCTGGTGAGGTCATACGCAGCAAGAAACATGATCCCTTAAATGGTTCATCATCTGTTATCCAACTTGGAAAAAGTATAGTGGAACCCGTCATTAGCATCACATCATGCAACAGAATAAGTGTGGATCCAGTTAGTGCCAATGATTGGGAGATATTGGAACTTCATGCTGGTTACATTGAGAGCCAGCTTCTCAATCAAGTGAGGGTGGTGTTCCCTGGCCAGTTACTGCCAATTTGGATTCAAAACAACATGTGCGTTCTTGTCCAAATTGTTAATCTTGAGCCTAATGCCAATTGTGTGAGGCTAGATGAGTTTACTGAAGTGGTTGTATCGCCAAAGGCAAGAACTTTTCCTCAACCAAAAAAAGACCAACAGGTGTCAGTTCTTACCGGTAAGGATATAACACCACAAGACAGCAGTCAAGCTCATGGTCTAGATACTGAACAAGAGCATGCAGCGACAAGTACGGCTTCTGTGTCTTATTTTGAGGATAGTGACAGTCAGTTGTTAACTGCGGGAACTCGTTCTTGTACCACAGATTCAGGAGACAAAGATTATTTTGTCAAAGGTGGCTTTATGTCAAGCTTTACTGGTTATCTACACACGTTATTATATCCTGATGGTGAAGAAAATCCTGTAAGTGAAAATCAGACTTCTAAATCTTTGATGCAGAAAGGAAGCAGTACACCAACTACTACTTCTACACAAAGTACTCAAAAATGTAATGGTAACATTCCCAAAGAAGCCGACTTTGATATGTGCATAAGAGTACAACCAGAGCTCACAATGAACAGCAACAAGTCAATTGTTCTGAAGTCATGGATTGGTAATTTGACAACATTTCCACCGCCAGATGGTACAATTGTAAAAACTGTTCAAATAAGTAGGTTGTTATCTCCAAAAGAGAGGGCTGCATCTCGAACAAATAGTGCATCAACAAACAGCCGTGACAACGTGGGATCAACATCGCGGGATTCTACAAACCAAGAATCTGATTCATCAAACAGAGGTATTCAAGATGCGACTGATCAGTCATCCTCTGATTCAGCCTCTGCTGGTGTACCTTCACGTCACTGGATTGTAAGGATGGTGATGACAAGCAGTATAAATAGCACCTATGTCAAACAAAAATCATGTGTATTGGGCGTGGCAGAGCATGTGTTACCAGGCCATGTGGTTATGTCCAAAGAACTGTTGCAACTCCTTGGTACAAGAGATTTATCTTTAGTTAAAATTCAGAATATCTGTTATGGACCGTCAGACATCCAAGGTGTTATCTTACATCCCTTTGGAGATACTGAACAGAAGCTTCAGGATGTTTCAGCTGAGTCAGCATTAGAAGCCTTCGAAGGGTGGATCTGTTCTGTCTGTAGCCTGGAGGCACCACTTGTACTCTGTAGTGGAATGCTGGTGTCCTTTGACATCTCTCAAGGCCATCCTCTTCAGTTTGTGGTTACAGTACTGAGCCATCACGAGACCTCCAGCTCAACGGACAAGATTCCATATTATCACTTAACCCCTGAGACCTTTGATAATGTGACAGTTGTTATAGGAACACCCCGTAACTCAGTGAATGGTTCAGAAGAATTAGTGAACGCTCAAGAAAGCAAGCCACAACATCCGAAGCATAGCATCACAGACTTGGGAGGTGTAACAGATGCTTTTCACAAATGCCTGGATCATGCCTTATCAGCCCTAGGGCAGAGACCACTATCCAATCATCTTGGAGGTAACATCATTACAGGGTTGTGCAGTGGGGCTCTGCTAATTTGTGGCAGTGGAAAAAGAGTTGATGCCATTCAAAAACAGTGGCAACAGATATTTGTTGAAGCAGCGTGGCATCAACCATCTGTTATCCTGTTTGATGACTTAGATCAAGTTGTTTCAGCTCCAAGTGCCCTCCAAGAAATGGGAGGCGAAGCTTTGTACAAACGCCGACTAGCCCAGGTATTCAAAGAACTTATCGCCACAGAGATCAACAACAATAGCAAAGTAGTTGTCATAGCAACCAGCAAGTCACGTGACTCATTGCACCCCTCACTTCTGACATCAAGAGGATGTCACGTCTTTCAGTGCTGTGCGGAGCTTCATCCACCCGACAATGACCAAAGGAAACAGATCTTATGTGCAATGGTAAACAAGAGGTTTCATTTGCAAGATCATGAGAGTTTAGAACTCAGTTTATTGGCAAAGAAACGAGGGATTCTCACCAAAAGATCTCCGATCACTGCTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O43933	Peroxisomal ATPase PEX1 OS=Homo sapiens OX=9606 GN=PEX1 PE=1 SV=1
Q5BL07	Peroxisomal ATPase PEX1 OS=Mus musculus OX=10090 GN=Pex1 PE=1 SV=2
G3GXG9	Peroxisomal ATPase PEX1 OS=Cricetulus griseus OX=10029 GN=PEX1 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003407 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004 all species →	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF09262 all species →	PEX-1N	Peroxisome biogenesis factor 1, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003959 all species →	Domain	ATPase, AAA-type, core	Interproscan
IPR029067 all species →	Homologous_superfamily	CDC48 domain 2-like superfamily	Interproscan
IPR015342 all species →	Domain	Peroxisomal ATPase PEX1, N-terminal C-lobe	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050168 all species →	Family	AAA ATPase domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23077 all species →	AAA-FAMILY ATPASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005777 all species →	Cellular Component	peroxisome	Interproscan
GO:0007031 all species →	Biological Process	peroxisome organization	Interproscan
GO:0005778 all species →	Cellular Component	peroxisomal membrane	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0016558 all species →	Biological Process	protein import into peroxisome matrix	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7390306.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.