Gene detail

Detailed information of KAJ7390397.1 in Desmophyllum pertusum

Genomic Location: MU825417.1:818332...868429
NR annotation: KAJ7390397.1, hypothetical protein OS493_025653 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7390397.1

ATGGTTTATACTATGGCTGAAATAAAATCAGGACCTTTATCACCAAAGAAGCCGGTCAAAGAGAAAATCGTTGGAATCTATGATGATTTCTTTAAGGGAGATGATCCATCTCGTGAAAGTCCAAATTTCTGGCATGAATTTTTTCTCATGAGGGTCAATGCTGTGTACTTGGAACAGTGTATTGATAAGCTCAGTGAAGAAGAACTTATGGATGTTAAGGAAAACCTCAACCTTCTGTTTTCTCAATGCTGTATTGCTTTGCGAGGAGATCACCAAATAAAACTAGTCAATGCTCTGCAGACGCTGTGTGCAATAGTCCGGGCGGTTTACAGAAAGAGATTAGGGGACCATGGGTTTGACATCATTAACATTTTGATTGGTTTTGATGCTGCCGAAGCACAAATGCAGGGATTGTTAGAAAGTTTGCACACATTTCTAGTTGGGGACTATCCAGTGAGCTTAAAGAACCTGTCACTTAAGCTGACTCTAATCCTTGTTACAGCAACTGACAATGTCAGTCAAAACACGATAGTGGAATATATCATGATTAACAGCATTTTTGAAGCTGTCATTCAGGTTCTCGCTGATCCAGTGGCCAGACAGCAACATGGCTATGAAGCAATGCTGCTTTTGACAATTCTGGTTAATTACAGAAAGTATGAAGCATCAAATCCTTATATTGGAAAGCTGTCAATCTTGGATGATGAATTGGCACTAAATGGTTTTGGCTGTGTAATATCAGCTGCGCTTACTGATTACAACAGGAAACATGCAGCCATGCTAGAACAGGCATCTGGAGGATTGATCAGTTCCATCACAAGCTTTGTTGGAAGCATGTTTGTTGCTGAGACAGAGAGAGCAGAATGTTTCAGTACCAACGAGGCTGTCCTTCTGGCGTTATATGAAGCAGTGCACCTAAACAGAAATTTCTTTACTGTCCTTAGTCATGTTACGACTGCCCCAGGGTCCAGTCCTCCTCCTTCACCTACAGCCGCTCCTCCGGTTGTTGAGAGGACTGCAACTGCTGCCGTTGTTGAAGATTTTCCTCCTGACTTGAGTCAGCCCACTAATTTACTGGTCACTCTATTGACGTATTCTTCCATTGCTCTTCAGAATACTAAAGATGACAAAGGTATAAGCAATGCCAAGCTGTGTCAGATCATTTTGACATGTATTGTTGAGGATCAATACGCGAATGTTTTTCTTCATGATGCTAACATGACGTTCTCAGTGCCTCTACATAGAGCGCAAATGTATCACAGAGGTGCTGTCATTGAAAAGAATGCTCCTTCAAGGCCTCTCGCTTGTGCGTTACTAGATCTTATGGTGGAGTTTATTGTAACTCACATGATGAAAACTTTACAAACTGACTTATACAGTAAAACATTTGGAATACTCCATCGCATGCTGTGTTATCAAAAGAGATGCCGCGTCAGGCTGTCTTACTCATGGAAGAGTTTCTGGACTGCTCTTATGAACTTCCTTAAGTTCCTTCTCTCCAATGAAACTCTGCTCACAAAGACCTGCGATATCTTCACCCTGGCATCACAGGTGGTTAACATCTTTAATTTGTTTATCACGTATGGAGACACATTTCTACCTTCTCCCACGTCATATGACGAACTGTATTACGAAATCATACGAGTGCATCAGATTTTCGACAACCTGTATTCAATGGCATTAAGACATTCAACAAATGGTGGCGACTGGAAGGATGCTGCATCTCGTCTCGCCAGTTCTTTAGTGAATGTCAGAGCAATCATAAACCATTTCACGCCGAAAATTGATTCATGGGCTGCTGTCAATCATCTGACGTCAATGTCTTCGGAAACAGGTATTGAGCGTGATTCGCAGAAAAGAGGCGGCCAACGGTTCGCGAAATGGACACGAAGTCAGGAATTAGCTGATAAAGAGAACCAAGGCATCCCAGAAAACTGGCAAAATGGGGAGCCGCCAAGAGTCGTCTCGATATTGAAGTCTTCGCAGAAAGGAAACTGCCCCTTCGAAAAGAAATTGGCCAAAGTCTCCTTCAAAAATTCTCCTGTGCGTCACACAATTCCTAGTTACAGCGACGCTGAAGTACGCGTTGATTGGGAGGAGATTCGTAAACTTGACGAAGAACAAAATTGGACAGAGAGAACACAAGTTGTGACCAAGGAAGATCACAAGCTAAACATCGACGCAGCAAAAGAGTTGCTTGACAAACTTATAACTGATTTGCCCTGTTTTAGGGAGCAATCAACTGCTACAAATATGACGACAAGTTCTGATGACCTCCCAGAGATAAATGTACCTGAGGTATCTCCTGGTGACGATATTGATATCAATGGTGATACTGCCGCGTATTTGGATGCGCCTGATGATGATCTAGAGACAGAGATTTTGTCTGACTTCTCAAAGTTGCAAATTAATAGTAATGACTGTCCACGGACCTTTTCACCCATTGGCAGTGAAAGGACATCACCTGAACAAGACAACTTAATGGATAGTAACGAAGACATAGACAAACTCCTGGCTTCACATGAAAATGACAACCTCGAAGATGATGATGATGTACTATCAACGGGAAACACGAGAACTGATAACTTGCTGAAGGAAATAACTAGCGAAGAGCACTGTTACAAGTCTGCCGAGCTGTTTTCTGTGAATCCCTCTGAACTCGAGAATGAGTTTCAAGAGAATGACACTTTAGAAGATCTACATGTAGTTAGCAGTGAAAAGACAGCGGAAGTCGAGGACTTGTTTGAACAGGACGCTGAAAATCAACAAGAGGATGACGATCAGTTTGGAGATGATGCATTTAAACCAGCAAGTGAAGCTATGTGGGAGCTTGATTATCTTGAGCAGTGTGGTAACAGCAATAAAGAATTTGAAATGTCAGCCCTGGCCCGTCAGTCTCTGTATGTTAAGTTTGATCCACTTGTCAAAGGGCCAAGTACTACTCAAAGCCCTGGAGTGAAAGGTAGCATGGGTGTGAGAGATATGGCACCACCAAAGCCGCTGAGCATGGGTGATAACCTTCTGTTGATGGATTCTCCCATGCCCCGTGGACGGTCCACAGTGCTGCCTGGACGCCGTACAAACAGGGACCATGCATTGTTAGAACAGGCCGACAGTCCATGTGGAGTGGATAAACTGCTGAATTTCACTCCTTCCAAATTAAACGAGGGGATGAAAACAGAATTTGAAAAAGACGAAGAGGATATTTTTGTGGAAGAGTCTGCTGACAACATTGTGGAAGAAACGCAGTCTGTGCCAGAAATAAGCAACATTGAGGTGAACGAGGAAGAACGGCCGCGCGGAAAGGCGCTGTTATACAGCAAAGAGGATTTAGATGCAGCTGTCAAGAGAGAGACGAAAGCTCTTCGTAAGCAGGCGCTGTTCTGTAGCAAGGAAGAGTTCGCCGCGGCAGTGAGGAATGAAACAGATGCTCTGCGTCAGCAGATGCAAGAGGAGGCTACAATTCGTGAAATGGAAAGCAAAGAACTGACGGACAGGAATCATCAACTAAAGAGGGAAACAGGAGAGTTAAGGGTCGTGATGCAAGAATACGAGAAGACCATCGCAGACATGATAGAAAAAAATCAGAAGTCCCAGGACCAGTATAATCACTCGACTTCAGAAGAAGCGAAGGAAAGAGACCAGCTGCAATCTGACTTGACCGCGGTAGAGACAGCCTTTTCAGACCTTCACAGAAGATACGAGAAGCTCAAAGGAGTAGTGGAGAATTTTAAAAAGAACGAAGAAATACTTAAAAAGGCAACAAACGACTACCAGGAGAAACTGAAAAGATCCGAGGAAAAATATCGCATGTTAAAGAAACACGCCGAAGAAAAAATAGAGAGTGCAAATATTGAGATCACTCGAGTACGGAAATCCATCGAGTCAGAGATAGCAGTAATGAAAGCGGCACTCAAGAAAGAGCAATCAAAGTCAGCCAGTTTAGAAATGAGTCTACAGCAGAAGATTACAGAAAATGCTGAACTTACAGCGATATGCGACGAGCTCATCAACAAAATGGGAGGTCCACGATCGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DCT2	Armadillo-like helical domain-containing protein 3 OS=Xenopus laevis OX=8355 GN=armh3 PE=2 SV=2
Q5T2E6	Armadillo-like helical domain-containing protein 3 OS=Homo sapiens OX=9606 GN=ARMH3 PE=1 SV=1
Q6PD19	Armadillo-like helical domain-containing protein 3 OS=Mus musculus OX=10090 GN=Armh3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005711 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08427 all species →	ARMH3_C	Armadillo-like helical domain-containing protein 3, C-terminal	Domain	Interproscan
PF05010 all species →	TACC_C	Transforming acidic coiled-coil-containing protein (TACC), C-terminal	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013636 all species →	Domain	Armadillo-like helical domain-containing protein 3, C-terminal	Interproscan
IPR039868 all species →	Family	Armadillo-like helical domain-containing protein 3-like	Interproscan
IPR007707 all species →	Domain	Transforming acidic coiled-coil-containing protein, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13608 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7390397.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.