Gene detail

Detailed information of KAJ7390681.1 in Desmophyllum pertusum

Genomic Location: MU825413.1:940309...961478
NR annotation: KAJ7390681.1, Tektin 3 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7390681.1

ATGACTCAATCTTTCGTGGAAACAGCGAAGTTTTTGTCGTCTTCGACCTTCGATCCTCCGCCATATCTACGGCCGCCCGGCGGACCTTATGAAACAACATATACGGCTTCGTTTCAAACAGGCAGACCATATACTTCCCCGCATTATTCTCTGAGGCCACTGTCGAGGTCTTTTGAATTTCCGTCTAAGATTCTAAACGGATCATCCACCGGCTTAGAACACTTGCCGTACACAGCGGTGACACAGCGCTCGATTCACAAGTATTCGCCTCAGCAATGGCGAACTTCGAACGTTCTCAATGTTTGTTCTGGGGAGAAGGAACGCGCGACTGCGGAGAGACTTCGAGATGAATGCTCGCGGCTCCGAACAGAGACGGCTTTGCTCACGCATCGAACGCAGACAGATGTCAACAAGAAGCTAGAACATCGCATTCACGATATCACCTACTGGAAGACGGAGCTGGAGAAGCAACACTCGGAAACTGTGGCCGAGATCAAAGCTTTGCAAGCGTTCATCGGCCGCTTGGAGAAAGCTTTAGCGGCGACGGAAAGGCCTTTGAACGTCTCTAAGCAATGCCTGGATTACAGAGAGAGGAGAGTCAAGATCGACCTGGTACACGACAATGTGGAGGCGCATATAAGCAAGGAAGTGGAAATGATCGAGAACGTAAGAGCTTTACTCAAGAAAACAATGGATCAAGCTCATGAGCAATTGTGGTTGCTGCGCTCTGCCAAAACTCTGCTGGAGAAGGACCTTGGTGACAAGTATGGGTCTCTTGGTATTGATGGAAAATGCTCCACAATGAACAACTTCTCTAAGGACATTCATTTTGCGCCCCACTCGGTCACAATCCAGCAACACTCCTTCACTCCGGATGAATGGGAAGCCTACTCCTCAGAAAACATTGCCAAGGCTGAGCGGGAACGCAAGGCGTCCGTGGCTCTACGATCCGAGATCAATGGTATCCTGATGCAGACCTATGTTGATCTGAGGAACATCTTTGAGACCGTGAACAATGAGTTCAGCAAGCGCATTGAAGAGACCCTCACTGCTAAGAGATCACTTGAGAAGGAACTGGCCAGGGTTATGGACGAGATAGCGTCGATGGAAAACAACGTGCGCGATCTAAGACAAGCCATCTCTGACAAGGAAAACCCCCTTAAAGTTGCTCACACCCGCTTGGACAAGCGCTCTCTGAGACCCAATGTTGAGCTGTGTCGCGACCCGGTGCAGTACCGTCTCGTCGGAGAAGTCGGAGAAATCAACGTCTCTATTGATCGCCTGCGCATGCGTCTGGCCGAGGCCGAGGCTTCCTTAATGGCGTTGCTTAGGAACAAGGAGCGACTGGAGGACGACATTGAAGTGAAGACAAACAGTCTGTTTATTGATCGTGACCAGTGTATGGTTATCAGGCAGCAGAAAGCTAAGAACCGCGGTAAATTGTTTTCCACTGGTTTCTGGAGTGAGCTTATATCGCGAGAATCAATGGCCGAGAACAAGGAATTGTTGGGTGGACTGTACGTCCAGGAGCAGTATGATGTAGACGGGACGCCAGATTCGTTTGGAAGAAGTCAGAGCTACCGTGTCGCTACGACACCATTAGTTGACAACGGGGCGAATGGCAAAGATGGCGACAAGCCGGCCAAGAAGCTTTCTAAGTCGAAAGCCAAGAAGAGGGAAAAGAAGGAAAATCTTGAAGACCTGAAGAAGGAATTAGAAATTGATTGGCATACGATCACTCTAGATGAGGTTTGCAGCCGTTTGGAAACGAACACTGAAACGGGTCTAACTAAAGAACAAGCTGCAGAAAATCTCAAGCGGGACGGTCCGAATTCCTTGACCCCTCCTCCTACCACCCCTGAGTGGGTGAAGTTCTGTCGACAGTTGTTTGGTGGCTTTGCGATGTTGTTGTGGGTTGGCGCCATTCTCTGTTTTATAGCCTTTGGCATTCTCGTAGCCACCGAGGAGGAACCATCAAAGGACAATTTGTATCTTGGGATTGTGTTTGACTGCTGTTGTGATTGTGACAGGAATCTTCTCATATTATCAAGAAGCCAAGAGTTCTCGAATCATGGAGGGCTTCAAAAATTTGGTTCCTCAAGAGGCACATGTTATGCGTGGTGGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9TTW3	Tektin-1 OS=Canis lupus familiaris OX=9615 GN=TEKT1 PE=2 SV=1
Q969V4	Tektin-1 OS=Homo sapiens OX=9606 GN=TEKT1 PE=1 SV=1
Q9DAJ2	Tektin-1 OS=Mus musculus OX=10090 GN=Tekt1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001532 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00690 all species →	Cation_ATPase_N	Cation transporter/ATPase, N-terminus	Domain	Interproscan
PF03148 all species →	Tektin	Tektin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004014 all species →	Domain	Cation-transporting P-type ATPase, N-terminal	Interproscan
IPR000435 all species →	Family	Tektins	Interproscan
IPR023298 all species →	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR048256 all species →	Family	Tektin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19960 all species →	TEKTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0060294 all species →	Biological Process	cilium movement involved in cell motility	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0015630 all species →	Cellular Component	microtubule cytoskeleton	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08486	STX1B_2_3; syntaxin 1B/2/3	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.