Gene detail

Detailed information of KAJ7391086.1 in Desmophyllum pertusum

Genomic Location: MU825408.1:340815...374851
NR annotation: KAJ7391086.1, Rho guanyl-nucleotide exchange factor [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7391086.1

ATGATGGATGCTGCTGAAAATCAAGATGGCCAGCACTTGATCCAACACTGTGTCATCATTCAACGTGATGAAAAAGGCTATGGTCTGACTGTTACAGGGGATAATCCAGTTTATGTACAGTCTGTGAAGGAAGATGGAGCAGCTTACCGCACAGGTGTACAAGTTGGTGATAAGATTATCAAGGTGAATGGAACTCTTGTGACACACTACAATCACATTGAAGTTGTCAACCTCATTAAATCTGGTTCCTATGTGGCACTGACTCTTCTAGGAAAACCACCGGCTCATCAAGCAGAGAGGCATGGATCTCCATCACCACCACCATTGAATATTGTGCCAAAAGACCCAGTAAAAGATGAGAGAACAATAACCATCCAAAGGGTACTTGATCAGGAGAGGCAGTTTTACAAGAAAACAAAGGAGGAGTATATGAGAAAACCATCAGAAAAGCTTCAAAAAGAGCTTGCAGAATCAACAACTCGAATCAAAGCATTTGATGCAGAACTCAATGCCTTAACCCAGTCTCAGCAGCCTATATCTAGTAACAATGGACCCTTCTCAGCACCCCCAAGTAAAACTGTGTCTCCAACATGGCAGTCAGCAAGCCGAATCCCAGCCAGGTGTCATTCAGTGCCATCTGAAGACAGCACCAGTCCCCCACCAGAACACGACCCTAATGCACTGTACGACAACTACCCTCCAATTATTATTGGAGAGATGCTCAATAACAGATCTCCTGGTGAGACTGACATGGAAGCCCCTTCCTCCCCGCCTCTTCCCCCGGAGAGAAAGTTTGTTCCGAAAGGGGACCAACTTACGCCACTTAGTGGTTTAGGTTCAGTTACTTATCCTGGAAAAAAAAGACATAAGAAGTTTTCTCTACCTGAGGGTCCAACACATGTAAGACAGCGCTCCAGTCCAGACGCTTTCTTTCGTCCCACTGTAAATGGCAGCTCCTCTGACAAAGCTTTGTCAAACAGAGATAACGGCAAGAAAAAGAGTTTTGATGATGCAACAGGAATGTCATGGGTGTATGGCTTCCTGGGATCTCCTGTTAAAACACGAAAAAATCTGACGACGTCATCCCTTCCAAGAGCATGGAACCCAACTAGTCACGAAAACAAAGCAATACAAATTGATGATGTAAGCAGCAAAGGTAGCAGCAGCAGTTCTCCGCCGCCAACGCCAACTCTATCTGAACCAATGGAGAAGAGAAGTCGCAGTGACACCGGAGAAATCTACGCTGATGGCGATGACGAGTCGCAGTGTAGCTCCACAGATACCAGCAAACTGAGTGTCACACAGCACAGCCAATCACATGGATCAATCATCTCTATGGAAGATGAAGAATTTGCATCAGATGACGAGAAGATCGATGATCATGGTCCATTCAATGATTTAGAAGTGCTTAAAAATAAACCAGCTCATCTGGCAGTTTTCCTCCATTACCTCATATCTAACAGTGATCCAAGTAGTTTGTTCTTTTGGATGGTAACAGATACCTACAGAGAAGGAACAGTAAAGGAAATGAGGAAATGGTCATATGAGATCTACTCAACATTTCTAGCAGAGCGGGCACCTCTTAAAGTTGATATGGCTAAAGAAACAATTGTAGAGACCATTGAGAGTTGCTTACGGTCAGAAGATAACCTCAAAAACCTGTTTAAACAAGCAAGGGTTGTTGCAGGAGATGAAATAAAAGAATTTTTAGCAGATTTCAGGAATAAACGAGCTCTTGGTCTTGGAAGTTTATTTGGAGATCACCAACTTGAAGATGACAACATGGAAAAAGGAAAGGAACTTCAAGTGGTAGAACAAATTCTGATGCCACACTTGGAGGGCATCTTGAGTGAACTGGATTCCAATACTTCTGCAGATGCATCTCAGATTGACAGAAACTCGGCTATGGCATCAGCGCTTACTACCTTTCTAAAACAAGTTGGAATCAGCATAAAGCAACAAGGAAACAATACAAACATCCTGGAACGATATTCAAGCTTCACACGGAAAGAGAACAAGCCCTTGTTTAAAATTAAAGCAAGCAAAAAGATTAAAGGACACCATTTTGTTAGTACACACTATACAAGTCCAACGTTTTGCAATCACTGTAGTGGTCTGCTGTGGGGTATCGGCGACCAAGGCTTCCTATGTTCAACTTGTGAATACAATGTACACAAAGGGAACTGCTTTGAGTCAATTGAGGAATGCCCAGGAACTAAGAAGAAAAGGAAAACTAATAATCAAGCTGGCAGATCAACGTCATTTGCTAATTATAATAGGAAAATTAGTCAATCAAGCTCATCTCCATATGGGAAAAACTGGAATCATGAAAATGATGATGAAAATGAGTCAGACAATGGTACAACAGTAGAATACAACAAGAAAAAGAGTGGTTCGTTTGATGAAGATCTGATTTCGGGTGGAAGAGAGAACAGAATGACTGGGGATGAACTTTCCAGGGTATCTGAGAGGGAAGGATTTTTGAGCTCTGGTGAGGATCATGCAATGTCAAAAATAAAAAGCTCTAGTGAACTGTTCCTTGATAAACCACACTTTCCAAAACTTGTTGGTAGATCAGAGAGTATGAAGACACCTAGAGAATTAAGTACAAAGCTGATAAGAATCAGAAGATCTGTGGCAGGAACTATGGAGTCTGTTGGAGATAGCCTTCATTACCGAGGTACAGGTGTGGATTCTCCTACAATGGATACACTCTCTGAAGATGGTAAGTTGTTGTTTTGTTATGTTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NZN5	Rho guanine nucleotide exchange factor 12 OS=Homo sapiens OX=9606 GN=ARHGEF12 PE=1 SV=1
Q8R4H2	Rho guanine nucleotide exchange factor 12 OS=Mus musculus OX=10090 GN=Arhgef12 PE=1 SV=2
O15085	Rho guanine nucleotide exchange factor 11 OS=Homo sapiens OX=9606 GN=ARHGEF11 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001592 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00130 all species →	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan
PF09128 all species →	RGS-like	Regulator of G protein signalling-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR044926 all species →	Homologous_superfamily	RGS, subdomain 2	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR020454 all species →	Domain	Diacylglycerol/phorbol-ester binding	Interproscan
IPR036305 all species →	Homologous_superfamily	RGS domain superfamily	Interproscan
IPR015212 all species →	Domain	Regulator of G protein signalling-like domain	Interproscan
IPR016137 all species →	Domain	RGS domain	Interproscan
IPR046349 all species →	Homologous_superfamily	C1-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45872 all species →	RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0001664 all species →	Molecular Function	G protein-coupled receptor binding	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7391086.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.