Gene detail

Detailed information of KAJ7392395.1 in Desmophyllum pertusum

Genomic Location: MU825401.1:1311345...1321530
NR annotation: KAJ7392395.1, Leucine-rich repeat serine/threonine-protein kinase 2 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7392395.1

ATGTGTCAATCTGAGTCACAACGAGTTTTTGAGTTTTCCTTACTGCCTTATCCAGGGGAAGTGAAAGTCATAAACTTGTCTCACAACAAGATAAAGATGAAGTCGCGTCCTCCGATGTCTGTGTCGAGTAGTGTTATGCTTGAGAACTTGAACTTGTCACACAATGGAGAAAGCTGCTTACCTGAGTGGTTAGGGGATTTCTTTCCCTGCTTAACAAGCCTGTATGTGGTGGGTAATAACATGAAGAATCTGCCGGATTCTGCTTTGAAGCTGCAGCGACTGAAAGTCCTAGACTTGTCAAATAACCAGCTGACAGAGATTCCGTCTAAATTCATTTCAGAATGTTTTTCTCTGGAAACTCTTGTGGCATCAAACAATTGCCTGACAACATTACCTGAGTCTGTTGGCCCATCCTTGACAAATTTAAAAACAGTTCGGTTGAACATAAATAAACTTGGAGAGAACTCATCAAAGAAACAATTTTCAATTCCTCGATTTCTTCTCACACTTCCCAATGTGAAAATTGTGGACCTTTCCAGTAACAATCTGGAAGACGTCCCGCCGCCCATTTCCTGGTCTACACAACAACTGAAAGAGCTTGTGCTAGCTGATAACAAGATCAAAAAGCTCTCTTTGGAGGGGGTAGAGAGTTGGCAACACCTTGAAAGACTGATTTTAAGCGACAACTGTCTGAAGCAAGTACCCAGCAGAATTGGTGAGTTGGCATCCCTGACCTCCCTTGACTTGAGTCGTAACACTGGCATCACACACTTACCAGATGAGATGGGAAGATTGTCCAATCTGTGGGACCTGCAGTTGGTCGGTCTCAGTCTTGATCTGGATTCAGCAATTCTAGAAAGCAAGGCTCAGGAGCTCATCGGATTCTTGCACTCCAAGCTCAAGAATTCTGTACCGTACTATCGCATGAAGTTGGTTGCTGTTGGGCAGACAGGACGAGGAAAGACAACCTTGCTGAACCAGCTACAGGAAAATATTGCTGCAGGACCACACCACGATGTCATGGTGAGAGAATGGTGCGTCAGAGACACAAAGGCTCAGTGCAAGACGTGCCATCGCAAAAGCGTGAACTACGTGATCAGCACGTGGGATCTCAAAGATCGTGTTGACTTATACAGTGCTTTTCAGTGCCTCCTGTCATCAAGGACATTGTTTCTGGTTGTCTATGATGTAAGCAAAGGCGTCGGTGAGATTGATGCTCTTAAGCCCTGGCTCCTCAACATACATGCCTGTGCCCCAGAGGCATCAGTCATGCTTGTGGGTACACATAAAGATAAGGTGCCAAAGGACCAGGTCGCTGAGTTACTCAATGAGATCAAGGTGAGGGCCCTTAGCATGTGTGCTGGTGCCGGCTTCCCCCAGGTCAAGAGCATTGTGGTCCTCGATTGCACTCAAGAAACCTCGGGAGTAAAGTCGCTCCGTGCCAAGATCATGCAGCTCATTACAAGATGCACATGCAAAGGTCATTCCTTGATTGGTCCTAGAGTACCACAGAACTTTGTGCGGCTACAGGACCTGATCTTGCATCACCTTCGCAACGAAGGACAGGAACCACCGAGAATCCTGAGAATGGCCAACATCCGAAAGCTCATTCAGGACAATGAAATACTCATGGATGATACTGAGGTTGAACAAGCTATCAGGTTCTTGAGTGAGGCAGGAGTACTCATCCATGTTGATGATCCAGCCTGTCAGTTGAATGATCTCCTTTTTGTTGACCCCGTGTGGGTGTTCCATCTGTTTGCCCATTTGGTGACAATAAAGGAATGTAAGAATGCCATCCTGGAATTGGAAGATCTTGAGAAATTGGTCCGAGGTGGAAGTGGTGTAGTCAACCTGACTCCAGATCTCATGCCGCAGATAATAAAGCTCCTTGAACACTATTGTGTTGTTCTTCCACTGAGAGATGACAGATACCTTTTGCCATCCTTGCTAAGCAATAAACAGCCCTCAATCAAGATCCCAAACCCAGGATGTAACGTGATTGTGAGACGTATATACCACCTGGCGTATCTGCCCCCTAGTTTCTGGCCACGCCTCATTACCAGAGTGCAGACATTTGTGGTGAACTTGTATATGGACCACAAGGCTCAACTGGAGAGCCCTCGTGAACCACGAGTCCAGCAGTGGAATGAAGGGGTCTTCATGCACTGGACAGACCAAGCATACTTTGTGATCTCTCACGGTTTGATCAATCCCAGCACCGACACCGTAGTAATTACAACACCAAGTACAAAACATGGAGCTAGAATTCTAGCTCATGTGGTGGATCATTTGGATACACTGCTAGAGGAATGGTTTCCGGACTTGTGTGGAGTGGATCCTCAGGAAGGTCTACCTCTTGTCAGGAAGCAGGCTGCGTGTCCTGTATGCAATGGAGACAATGCTCACACTTTCGACCTTGACTGCATAGCTAAGGCGAGTGCAAATGAATACATCATGTGCCCCAACACTAAATTGCTGGTGTCCCTGCGCCAGATAGCCCCTGATGTGGTCATGGAAGATGTTGGTGAACACTTCAGGATTGAGGAGAGTAAACTGGTGCTGAATATAAACCGTGCCTCGCTGCTTGGAGACGGGGCCTTTGGAGCAGTGTACAGGGCACTATATCATGGAAAGTCTGTTGCCGCCAAGGTGTTTCATCCGGGAAATGAGTGCAATCCTCACACCTTACTGCGTCAGGAGGTGATGTTCTTACGTAAGTTACGTCATCTGAGCATTATCAGTATGGTCGGCGCATGTGTGAAGCCGTGGTCTCTGATCATGGAGTTGGCTCCGCTGGGATCACTGAGCATGCTTTTAAACAGCGGAACGGCACTGAGCAGAGGAATTCAACACAGAATCGCCTTACAGGTTGCAGAAGGCTTAGCATTCTTACACCATCACATGATTGTGTACCGTGATTTAAAACCTCATAACATCCTGATCTTCTCCCTTTCTGTGGTAAACCTGATCAACGCCAAGATATCCGATTACGGCATCGCTCGGTACGCCACTTGCTGCGGCTTAACCTCCACTGAAGGTACTCCGGGGTATCGAGCACCCGAAATTGCCCGAGGCGACATTGCCTACAACTCGGAAGTCGATATGTACTCATTTGGGATGTTCCTTTACGAGCTTGTGACCGGAGGAACCAAACCATTTGAAGACTTGCGCTTCCGTCACGAACTGGATGCGGCTGTGTTGAAAGGCCGAGCATTAGATCCTATCACGTCATTTGACTGCCCTCCATGGCCTGACTTGGCGGATCTTATTGCGCATGCTCTTGAGCCTCGGCCGAATAGACGAGCAACAGCTGAACAGGCATATTCGCGCTTGTGTGACCCCGAGGTGATCTGTTTGAAGCGTGACATCGCCGTATCCAAGGGACAGACAGTAGAGTGCATGACTGTCCGTCACTTCACTGAAGATAACATACCTAAAGTTGAGGTGTGGGTGGGCAGTGGACAGTCGGATGACCTCAGTGCTCAGGTGACCATAATTGACCTCTCGGACATGGGAGTCAAGGGCTGCACGGGTACATTTATCCGAGACAGACGGGTGAAGAGTATCGTAGCAGTGGATAGCGACACCGTGTTGGCCGGTACCCAGTCCGGTAAAATCTGGGTGTTTGATGCTTGGAACCACGAGTGCCGGTTCTCTCTGCCTAAGTTGCCTGATGCGGTTCTCTGCCTCAGACACTACAAAGTCCAGAAGGTCAACAAGGACAGAGCGAAAGACGGAGCCAAGGACGGAGCTAAGGATGGAGCCAAGAATGTACTGGATGTGGATATAGTGCTGGCAGGGCTCGCTAACGGCCAGTTAGCTGTGTATGACAGTATCCGTCCGTCTGGTAGCCGTCTGGTAGCCGTAGAGGAAGATGCTAAGCCTAAGCTAGCCGTAGAGGAAGATGCTAAGCCTAAGCTTTTTGATTTGTGTCACAGCAAGATCATTGAGGGTACCCCCTGTAAGGATTGTAAGGCGCATCCCTTGGCATGCACGGCTGTTGGCAAGAATAGGTTGTTCTGCGGATGCGGTAACGAAATAGTCGTTCTCAGAATAAAACAGAACGTTGTTATTGACATAGAGAGTCGATGGTTCGTCGAGGACAGGGCCAAGGGGCTTGTTTTAAACATCGCTGTGGGATCCACGTTTGTTTGGATCTCAACTCGTGATAGTCCAGTCATCGAGTGCTGGGATTTCTCCAAGGCCAGGTTACTTGGCTCTGTTGACTGTCTGTCAATTCTCAGAGACTCTGGGTACACTGGAGACTTACGTGAAACACGAGTTGTCAGTCTTCTCCTGTCGCACAAGACTCTCTGGGTTGGACTGGGCACTGGTCACGTGGTTCTTGTAGACCCTTCAACGCGGAAGCCATTGACCTTGATCCACCGTCACGTGTCCGCTGTACGCTGTCTCGCAGACACACGGGGTACCACATCTACTAAGTCGACTTCTCTGGTGTTGACCGGGGGTATGGGGTTTATTGAGAGGCATGGGTGCGAGTGGAAGAAGGCTAACACCGAGTTCGGGTATACACTTGTGTGGGAGGCAGACTTCATGGAACAGGCCAAGCACCTGGAGAGTCACATACGTAAAAGGCGTGAACTTTCAAATACGCTTGTGGAATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5S007	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens OX=9606 GN=LRRK2 PE=1 SV=2
Q5S006	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2
Q3UHC2	Leucine-rich repeat serine/threonine-protein kinase 1 OS=Mus musculus OX=10090 GN=Lrrk1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003558 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477 all species →	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF16095 all species →	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR050647 all species →	Family	Plant LRR receptor-like serine/threonine-protein kinases	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR020859 all species →	Domain	Roc domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR032171 all species →	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48056 all species →	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7392395.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.