Detailed information of KAJ7393353.1 in Desmophyllum pertusum

Genomic Location: MU825398.1:2025778...2036971
NR annotation: KAJ7393353.1, cleavage stimulation factor, 3' pre-RNA, subunit 1 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q05048Cleavage stimulation factor subunit 1 OS=Homo sapiens OX=9606 GN=CSTF1 PE=1 SV=1
Q99LC2Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1
Q5R8K2Cleavage stimulation factor subunit 1 OS=Pongo abelii OX=9601 GN=CSTF1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002738 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16699
all species →		CSTF1_dimerCleavage stimulation factor subunit 1, dimerisation domainDomainInterproscan
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR044633
all species →		FamilyCleavage stimulation factor subunit 1-likeInterproscan
IPR032028
all species →		DomainCleavage stimulation factor subunit 1, dimerisation domainInterproscan
IPR038184
all species →		Homologous_superfamilyCSTF1, dimerization domain superfamilyInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44133
all species →		CLEAVAGE STIMULATION FACTOR SUBUNIT 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005848
all species →		Cellular ComponentmRNA cleavage stimulating factor complexInterproscan
GO:0031124
all species →		Biological ProcessmRNA 3'-end processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7393353.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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