Gene detail

Detailed information of KAJ7393931.1 in Desmophyllum pertusum

Genomic Location: MU825397.1:3543731...3550280
NR annotation: KAJ7393931.1, AP-3 complex subunit sigma-1 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2YDH6	AP-3 complex subunit sigma-1 OS=Bos taurus OX=9913 GN=AP3S1 PE=2 SV=1
Q92572	AP-3 complex subunit sigma-1 OS=Homo sapiens OX=9606 GN=AP3S1 PE=1 SV=1
Q9DCR2	AP-3 complex subunit sigma-1 OS=Mus musculus OX=10090 GN=Ap3s1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009295 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01217 all species →	Clat_adaptor_s	Clathrin adaptor complex small chain	Domain	Interproscan
PF09032 all species →	Siah-Interact_N	Siah interacting protein, N terminal	Domain	Interproscan
PF05002 all species →	SGS	SGS domain	Domain	Interproscan
PF04969 all species →	CS	CS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052289 all species →	Family	Calcyclin-binding ubiquitin ligase bridge	Interproscan
IPR007699 all species →	Domain	SGS domain	Interproscan
IPR022775 all species →	Domain	AP complex, mu/sigma subunit	Interproscan
IPR015120 all species →	Domain	Siah interacting protein, N-terminal	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR000804 all species →	Conserved_site	Clathrin adaptor complex, small chain	Interproscan
IPR037893 all species →	Domain	Calcyclin-binding Protein, CS domain	Interproscan
IPR007052 all species →	Domain	CS domain	Interproscan
IPR027155 all species →	Family	AP-3 complex subunit sigma	Interproscan
IPR011012 all species →	Homologous_superfamily	Longin-like domain superfamily	Interproscan
IPR037201 all species →	Homologous_superfamily	Calcyclin-binding protein, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13164 all species →	CALICYLIN BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030117 all species →	Cellular Component	membrane coat	Interproscan
GO:0015631 all species →	Molecular Function	tubulin binding	Interproscan
GO:0031625 all species →	Molecular Function	ubiquitin protein ligase binding	Interproscan
GO:0044548 all species →	Molecular Function	S100 protein binding	Interproscan
GO:0006896 all species →	Biological Process	Golgi to vacuole transport	Interproscan
GO:0030123 all species →	Cellular Component	AP-3 adaptor complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7393931.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.