Detailed information of KAJ7394068.1 in Desmophyllum pertusum

Genomic Location: MU825397.1:5467089...5471006
NR annotation: KAJ7394068.1, Tar (HIV-1) RNA binding protein 1 [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q13395tRNA (guanosine(18)-2'-O)-methyltransferase TARBP1 OS=Homo sapiens OX=9606 GN=TARBP1 PE=1 SV=1
E9Q368tRNA (guanosine(18)-2'-O)-methyltransferase TARBP1 OS=Mus musculus OX=10090 GN=Tarbp1 PE=1 SV=1
Q07527tRNA (guanosine(18)-2'-O)-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRM3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005153 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00588
all species →		SpoU_methylaseSpoU rRNA Methylase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045330
all species →		FamilyProbable methyltransferase Trm3/TARBP1Interproscan
IPR001537
all species →		DomaintRNA/rRNA methyltransferase, SpoU typeInterproscan
IPR044748
all species →		DomainTrm3/ TARBP1, C-terminalInterproscan
IPR029026
all species →		Homologous_superfamilytRNA (guanine-N1-)-methyltransferase, N-terminalInterproscan
IPR029028
all species →		Homologous_superfamilyAlpha/beta knot methyltransferasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12029
all species →		RNA METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016423
all species →		Molecular FunctiontRNA (guanine) methyltransferase activityInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0008173
all species →		Molecular FunctionRNA methyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAJ7394068.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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