Gene detail

Detailed information of KAJ7394632.1 in Desmophyllum pertusum

Genomic Location: MU825396.1:5381992...5401260
NR annotation: KAJ7394632.1, calcium ion binding [Desmophyllum pertusum]
Species Desmophyllum pertusum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAJ7394632.1

ATGACAAGTAGCAAACATGACACAGCCACAGAAAGCGCTGTTGTTATCACCCTTATCCTGTCCCTAAGGAAAAATGTAGAAAATGGTAGTGAAAAGAGCAATTTCAACATCTTGAACCTGGCGCTTTGTTTTTCAACTGATCACTACACATGGTATCTTTTTCCAAATGCAACAAATCGCTTATATGGATACCAACAACAGACGAACCAATCGTTTGAGAGCGACGTCCTACCCAGTGGTTCAAGAGTTATCACAGAAGACAACGTGAATGGACTCTGGGTACCAGCTGGAGAAAAGGTCAACCTTGGACAGTTTGCCGCTACATGTCTTGCAGATGCTGCAATATGTCAGAACTTTACAGTCTCGTTTCTGTTCAAAGTCAACGGATCGATTCCAGAAAATGAAACAGTAGACGTTATCCATCAGATGCCACTAACTGATGGAGAACACCTTCTTCAGTTCAGTGTCTTTCACAATGGCTCTCATTACGTGGGTGCTGCGACTGTGGCTCGCGGCCATAACCGGACAGATGTCACTGGTGTGATTCAGCGGACAGATAGTTGGATTCATGTCGCAATTGTCTCCACTAAACCATATTATCTCGAACTTTTCCTTAACGGAACTAAGGAACAAGCAAATGCCTCTTCTGTAGCTTACAATGGTTCCAATTCACAAGTGAATATGACCCTTGGTTCTTCCAACAGCTCTAACGGTTTTTTCGTGAGTTATTTACAACTTATCCAATGCGCGATAAGCCAAGCTGATGTAACAGCATTAAAAGACCAGAGCTTTACTCAAGCTATAAATCCAAATCGAACAACAGTGATAGTTCGCCAGTCTTCAAGAGTTTTTCGTGAATCAGATGAAAGAGTAACTATCTTCATTGAAAGAAAAGACAACCTTGCATTGGTATCAGTCGTGATGTACTCCTTGTCATATGGTACTGCCACTTCTTCCGATTTTACTTTTCAAGATTCACAAAATGGCGGAAAGTTGATATTTAAACCAGGCGAGATCATGAAGAGTTTGTCAGTGAACATTTTAAGTAACACTATACCAGAAATGAATGAAACCTTCCACTTGATCATCAATTCAGATGATGGCGTTACAGATGTTCCTGGAAATATTCCGATACTTATCTTGGATGATGATGCCTACCTGTGCTACTTGTTTCCCATTGGTGCAAAACGCGTCTACTGTTATGAACCAATGACAAACCAGTCTTTTGAAAGCAATGAACTGTCTCCTGAAACAAATGTGTCGACGAAAAGCAACACGCATAGCCTTCACATACCAAAGAAAAACGAAGTCATCCTGGGAGAGTTTGCTAATTCTTGTTTAGAAAATGCTTCTGTGTGTGACAGTTTTACCATTTCATTCCTGGTTTACATTGATGGATCAGTGAATGTGGATGAAGATGTGCACGTGTTAGACTCAAATTCATTAAATCGAGGCTCGTACCATATCCAGTTCATGGTCACCAGGAAAGTCGCCCGACTTGAAGGACATGCTTTTGTTGTTGGTGGTAACTCTTCAACTCTTCTGGAGAGGAAAGGAGAGTTTCCCTCAACTGAGACTTGGGTTCACGTTGCTATTAGCTACTCAATTTCCGGAAGTCTAGACTTGTATATGAACAGCGCGATGGTCACAGAAAATGATCCAGTAATAAAAACTCCTTGGATAAACGACAGATCAGCCGTTCAAGTATCCTTAGGTTCGACACATAACATACGTGACATCTTTCTAAGTTATCTTCAAATCATCAAGGGAAGACCATCTAAAGAGGAAGTAGCGCAGCTAGAAACAGACAGTCGACAACAAGCTACCTACCCATTGATGGCACAGTTAGAGTTAAGCCACGAAAACATCGTTGAAAGCGAAGATATTGGCTTGATAACAGTGCCCTTGTCACGAACTGGAAACTTGCTTATAGCATCAGTAATAAGATATTTTATAAAGAATGAAACATCCATGTCCAAAGATGTATCAAGCCAAGAAGTTGTTATTCGGCCTGGGGAAACATCTGGGAACATATCGGTGGTGATAATTGACGACCATGTCCCTGAAAGAAATGAGAGCTTTTCAATTACAGTCTCTACATCAGACAGTGTAACTATCTTTTCAGAGACCGCTGTGAATATTACTATATTAGACAATGATATAAATGATTGTTCACCTAATCCATGTCAGAATGAAGGCAACTGCACTGATCAAATCAACGACTATATCTGCACATGCGCTGTTGGATACACTGGAAAGAACTGTAGCATTAATTCCTACCTGCTGTATTTGTTTCCTACTGGAGCTGGCCGTGTTTATGGTTATGATACCGCAAATAACCAATCTTTTGAAAGCCACATACTGCCAGCTGGCACGAATGTAGCCAACAAGGACGGTTTCCATGGACTTTGCATACCAATGAAAACCGAAGTGATCGTTGGCCCCTTTGCCGACCAATGCTTAGGAGATTCCAGCATTTGCGACAGTTTTACCATTTCATTCCTAGCCTATGTAAATGGTGCAGTGGCTGAAAATGAAGACGTCCATATATTATATTCCACTCCTTTAACTCAAGGACTGTATCATGTACAGTTTACTGTCACTCGAACTGTATCACGTTTAGAGGGACAGGCGTACATTGTGGGCGGGAATTCTTCGACTCTTCTTGAAAGGAAAGGGCTATTTCCCGGCGTAAACAGATGGGTTCATGTTGCAATCGTCTACTCACAGTCTCGCCGAAAGCTTGACCTGTATATGAACAGTGATAAGGTGACAGACCCTACTGCAACCATTCCCTGGAATAACATCAGATCGGGTGTTAACGTTTCTTTAGCTTCTGCTGGAAACTTAAAAGAAATCTGTATAAGTTACTTTCAGATCATTAGAGGCGTTTTAACAGAGAAGGAAATACGACAGCTTGAACAAGAAAGTCGGACACAAGCGGCCAAACCCTCTATGGTAGAAGCAAGGTTCCTTCACAGCAACGTTGTTGTTAATGAAGATGTTCAGAGGTTGACAGTACCTGTCACGCGGGATGGAAACGAATTCATAGCATCTGTGCTGACATTTAACGCAAGTGATGGTGATGCCATTTTCCAGCTGGACTTTGATCATCTACTAAATCAAGAGATTCTTATGAAACCTGGAGAAAGATCTGTTGCAATCTCAGTGAACATCACAAATGATATCTTACCTGAAAATAATGAGACGTTCCTTTTAACATTGATAGCATCAGACAAGGTGACTACCATAACCGGTGGCTCTACAACGATAATTATCTTGAACAATGGAAGCTTTGAAGGGAAAAACTGTTCTAGCGTTTCGGCGTCAACTGAAGACGAAGGCGATGAAGTGATACGCATCCTATTCTGGCTTGTGTTGGAGCCTGTGCTGTTTCCTTGCTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P49013	Fibropellin-3 OS=Strongylocentrotus purpuratus OX=7668 GN=EGF3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006031 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan
PF03160 all species →	Calx-beta	Calx-beta domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038081 all species →	Homologous_superfamily	CalX-like domain superfamily	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR003644 all species →	Domain	Na-Ca exchanger/integrin-beta4	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR026919 all species →	Family	Adhesion G-protein coupled receptor V1	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46682 all species →	ADHESION G-PROTEIN COUPLED RECEPTOR V1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007154 all species →	Biological Process	cell communication	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0001965 all species →	Molecular Function	G-protein alpha-subunit binding	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007194 all species →	Biological Process	negative regulation of adenylate cyclase activity	Interproscan
GO:0010855 all species →	Molecular Function	adenylate cyclase inhibitor activity	Interproscan
GO:0071277 all species →	Biological Process	cellular response to calcium ion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAJ7394632.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.