Gene detail

Detailed information of KAK2547867.1 in Acropora cervicornis

Genomic Location: JARQWQ010000165.1:199258...219879
NR annotation: XP_044183965.1, arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAK2547867.1

ATGCCTGACAGAATAAGCGTACGAAGCTTCCTCAACGAAGCTACACAAGATGTATCATCTCCAACAACGTCAAATTTCTTGTCAACAATGAGTGCTTGCCGCAACTCCGTAGGAGCACTAGAGGAGAGTCTTGATGAGGACTACAATATCTTGAGCAAATTGAAGAAATCCAGCAAAAATGTTCATGCAGCTGGACTGAATTATTCAACAAATCAGTTATCATTAGCAGAGAATCTTGAAAAACTTGGCACATCATTTCTCTCAAAAGAAGCTGACACAGGAATTGGAACAGCTTTCTTAAAGTTTTCTGTTACGTTTAAGGAACTTTGTTCAGTTATGAAAACACTGTTTACAAATTACCACAACATGGTTCTATTTCCCCTGGATTCCTTGTTGAAAGGGGATCTACGAGATATTAAAGGGGACATGAGAAAACCATTTGACAAAGCTTGGAGAGAGTATGAGGCCAAAGTGGCAAAGATTGAAAAAGAAAAGAAGAAAATTGCTCAAGAGGCTGGATTAGTGAGGGCAGAAGTCACAGGTGCAGAGATTGCAGATGAAACAGAAAGGGAGAGAAGAATGTTTCAGATGCAAATGTGTGAGGTTTTAATCAAAGGGAATGAAATTAAAGTCAAGAAAGGAGTGGAGTTGGCTCAGCATCTGGTGGAATTCTACCATGCGCAAGTCACCTACTTTCAGTCGGGATCACAAGTCTTGGAAAGCATGAAAGGCTATTTAGAAGAACTTGCAGCAGATCTGCAACAGTTAAAGGCAAAACAAGATGAGGAAAGAAGAGAACTAAACCAACTGAAAAATGATATCAAAAGCCAGCTACAAATGGAGAAGGAACAGACAACTCCAAGCAAAAGCGGCTACAGTTTACATGGTCAACAAGGGGATAAGAACTATGGAAATGAAAGATTTGGCTTCTTGCTCAAGCGCAGTGAAGGGCTAAGGAAAGTTTGGCAAAAGAGATACTGTGTGGCCAAGGAGGGGCAATTCACATTAGCTCATTCACCGACCAGTCGACCAACTCAAACCCTAAATCTTCTTGTTTGTCAAATTAAAGAAGATGATGGAAAGAAACATGCTTTCAACATTGTGTCGCATAACAGAACGTATTTATTTCAAGCTGATGATGAGACGGATTTAGAAGCGTGGGTATCTGTGCTAAGCAACTGCCGGACAGAAGCATTAGAAAAAGCATTTGGCGACAGTGACAAAGCCGAGTCTGAAGAGAACTCGTCTGTGGTCAGCAATCTGAAAGAGTTGAGGCAGAGAATTGTCAAACAAGTGCGGCGGTTACCAGGCAACGACACATGCGCGGACTGTTCGGGAAAAGATCCTACTTGGCTCGCTACCAATCTGGGCGTGTTGTTATGTATCGAGTGTTCAGGGATTCACAGAGAAATGGGCGTACACATCTCCAGAATACGATCCATTGAGCTGGATAAACTGGGAACAGTCGAATTGCTGCAAGCCAAGGCTGTTGGTAATGGCGGATTTAATGAAATCATGGAGGCGACTCTGGACTACAACGAGAAACCCACCGCATCGAGTAACATGGATGAACGCAAAGAGTTTATCCGAGCGAAGTACATTCAACACAAGTACGCTATCAAGTCTGGAGATAATACAGACAAGATACTGCAGGAGCTCCATCAAGCTGTGAAATCCAAAGATATTTTAGCTGTTTTACAAGCATTTGCTGAAGGAGTTGATCTATCGGCACCTCTCCCTGGTCATCCCAAAAACGCAACTGCGCTCCATGTCGCTGTCGAACAAGAAGACCTGACTTCGCTTCACATTGTTGACTTCCTCGCACAGAATTGCAATGAAGTCAACACGACTGATCAAGAAGGCAACACGGCTCTACATGTAGCAGCGTTGTCAAGCAAAATCGAGTGTATGAGAGTTTTGTTAAGAGCCGGCGGAACAGAAAGTCTCAATGCTAGAAACAAAGATGGAAAAACAGCATTAGACATTGCCAAGGATTTAGGGAATCCAGAGTCTATCGAACTGCTCAAACAAAGCGCTGCCGATAAATTGGTGCAGTGTGAGAATGTGAAGATAGATTGGGGACTCAATGAGGCAGATGGAATTTACGATGATCCCTTAGAACTTATGGACATAAGACCCGAGCTCAGCGATGACGAGGTATTGAACGATAAGAGTCGCTCCAGTCCTCCAACGCCTCCGCGTCACAGGCGCCAGTTGAACAGCCGACCTGTCAGTCAAATGATCTTACCTGGAGGGGGTCTCCTGAAAGGAGCACAAGGTCTCCCAGGGATAAGCCCCATGTTATCAGGCCGTGGGCTTTCAAGAAACGACTCTCCGTCGATCGACAAGCTCGCTCTTATGGGATCCCCTGTGATCAGACGCCGAGCACCGGTCCCTCCCTCTGGTGAAACTGTCGCGGTAAATGTACGTGCCAGCATGTTCGTTCCCTCGACAGCAACTGATAACAGCTTCACTTCCATGACAAGCACATTTGGTCACGGACCGAAGGGAAAAGCAGGAGATGAAGCCGGTAGTGACCCTTGCGATCTCGCTCCCATCCCGCCTGTCCGCTGTTCCTCTGTCAGCCGTGATCGGGACAAACGCTTTGGTGTTGATGGCCCTCTTCCTCCATTACCGGCCAAACCAAAGTTTGATGATCCTTCTTCCAGAGCTCCTCCTTCGGAGAGCAAAACGCGGCCTGTCACCGAGGTTGTCAACCGACGAGCCCCGCCTATTCCACCCCCTCCGAGAAGAACATCTTCGGACCTTAAACCGATGGCACCCCCCCTTCCCATGCACCGAAGATCGAAATCCGAAGGGAAGCTTGTTGACGAGCTTTTCGCCGCCTCTTCAGGATCAAAATCAAAACTTCCGTTGGAGAAAAAACTCTCAGATTCAGCGGATAAAGGAGATGAAAACAAGGATCGCCCGATACCTCCTCCCAGACCTCTCAAGCACAACTCGATCCGAGTGACGTCATCTCCATCGTTGGTGGCCAATGGTAACATCACGCCAAGGTCGGTGGCGTGGACCGAGTCGCTCTTTTACGTTATGTAA

Transcript

Protein

Uniprot

Uniprot term	Description
O97902	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Bos taurus OX=9913 GN=ASAP1 PE=1 SV=1
Q9ULH1	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens OX=9606 GN=ASAP1 PE=1 SV=4
Q1AAU6	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Asap1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01412	ArfGap	Putative GTPase activating protein for Arf	Domain	Interproscan
PF16746	BAR_3	BAR domain of APPL family	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00169	PH	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR001164	Domain	Arf GTPase activating protein	Interproscan
IPR037278	Homologous_superfamily	ARFGAP/RecO-like zinc finger	Interproscan
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR004148	Domain	BAR domain	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR043593	Family	Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein	Interproscan
IPR038508	Homologous_superfamily	ArfGAP domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45854	ASAP FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12488	ASAP; Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein	-	Membrane trafficking	ko04131	deepkoala