Detailed information of KAK2547921.1 in Acropora cervicornis

Genomic Location: JARQWQ010000162.1:37946...70723
NR annotation: XP_044177912.1, ubiquitin carboxyl-terminal hydrolase 5-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P56399Ubiquitin carboxyl-terminal hydrolase 5 OS=Mus musculus OX=10090 GN=Usp5 PE=1 SV=1
P45974Ubiquitin carboxyl-terminal hydrolase 5 OS=Homo sapiens OX=9606 GN=USP5 PE=1 SV=2
Q5R407Ubiquitin carboxyl-terminal hydrolase 5 OS=Pongo abelii OX=9601 GN=UBP5 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBA
Ubiquitin FamilyDUB|USP|USP
Ubiquitin FamilyUBD|ZnF|ZnF_UBP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17807zf-UBP_varVariant UBP zinc fingerDomainInterproscan
PF03959FSH1Serine hydrolase (FSH1)DomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF00627UBAUBA/TS-N domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR041432DomainUbiquitinyl hydrolase, variant UBP zinc fingerInterproscan
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR005645DomainSerine hydrolase domainInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050593FamilyLovastatin nonaketide synthase thioesteraseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48070ESTERASE OVCA2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0032526Biological Processresponse to retinoic acidInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01942HLCS; biotin---protein ligaseEC:6.3.4.9
EC:6.3.4.10
EC:6.3.4.11
EC:6.3.4.15
Biotin metabolismko00780deepkoala

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