Gene detail

Detailed information of KAK2548581.1 in Acropora cervicornis

Genomic Location: JARQWQ010000143.1:387838...389305
NR annotation: XP_027042742.1, tigger transposable element-derived protein 6-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8IY51	Tigger transposable element-derived protein 4 OS=Homo sapiens OX=9606 GN=TIGD4 PE=1 SV=2
Q4W5G0	Tigger transposable element-derived protein 2 OS=Homo sapiens OX=9606 GN=TIGD2 PE=1 SV=1
Q0VBL1	Tigger transposable element-derived protein 2 OS=Mus musculus OX=10090 GN=Tigd2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19303	TRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan