Gene detail

Detailed information of KAK2548677.1 in Acropora cervicornis

Genomic Location: JARQWQ010000141.1:54972...78629
NR annotation: XP_044183099.1, vesicle-fusing ATPase-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAK2548677.1

ATGGTTCAAGTGAAAGTATCCAAGTGTCCGTCAGATAAGCTATCGTTGTCGAACTGTCTTATTGTCAATGAAAATGATTTTAACCCAGAAAGAGTTAAATATGTCGAAGTTCGTACCAATGCTCCCCGAGGTTTTGTGTTTACCATTAAGGTTTCTGAGGATATCGCTCCAGGATCAGTTGGATTCAGTCTTGTTCAGAGGAAGTGGGCCAGTGTGCAACTCAACAGTTTGGTTGACATGGTTCCTTACAGATTTAGTGAAGGGTCATTCCTGTCAAATATTACTGTTGAGGCAGACTTTCTTCAAAAAGCCAAGGCTAACAGTGAGGCTTATGACACAAACAAAATGGCTGAAGAGTTTACACATCAATTTTTGGACCAAGCTTTTTCTGTAGGACAACAGGCTGTATTTGCTTTTCAAGACAAGAAGTATCTCATATTATGTGTAAAGAGTATGGAAGTGATTGATGTCAGTCTTCTGGGGGGTTCAGATGCAAAGGCTTCACAAGGAACAAATGTTTCCATTGGTGTTGTGACAAGAAACACTCAAGTCCTGTTTGAAAGAGCTGAGGGGTCAGTGTTAAACCTCACTGGTACTGCTAAGGGCAAAGCCGCCACCCAGTCTATCATCAGCCGCGACTGGGACTTCACTAAGCTTGGAATTGGAGGGCTTGATAAGGAATTCTCAAATATTATAAGAAGAGCCTTTGCAACAAGGCTGTTTCCTCCTGAGGTTGTTGATAAACTTGGATTGAGGCATGTGAAAGGAATTCTGCTGCATGGACCACCAGGAACTGGCAAGACTCTTATGGCACGACAAATTGGAAAGATGTTAAACACAAGAGAGCCAAAGATAATCAGTGGACCAGAGGTGCTTAATAAATATGTGGGAGAGTCAGAAGCAAACATAAGAAAGCTTTTCGCGGAAGCAGAAGAGGAACAGAAGAAGTTCGGAGACAACAGTGGTTTACATCTGATTATCTTTGACGAGTTCGACGCTGTCTGTAAATCAAGATACATGTACAATTCCGGCGGCACTGGTGTACAAGATTCAGTGGTCAATCAGCTTCTTGCAAAGATTGATGGTGTGGAGCAGCTCAACAACGTTCTACTCATTGGAATGACCAACAGGAGAGACCTCATTGATGATGCTTTGCTTAGACCAGGACGCCTCGAAGTGCAGGTTGAAATTGGCTTACCTGATGAGAATGGAAGAGTTCAAATCCTAGAGATACATACAGCTAAGATGAAGGAACACAAACTTCTTGCACCCGATGTGGACCTACCTGATTTAGCTGCACAAACCAAAAACTTCACTGGTGCTGAGATTGAAGGACTGGTGCGAGCGGCCCAGTCTACCGCAATGAACCGTTTTATTCAGCTGAAAACCAATTTTGAGATTGACCCTGAAGCTGCTGAAAAGATTGTCATCAGACAAGAGGATTTTTACCATGCTTTAGAATATGATATCAAACCGGCATTTGGACCTGCAGATGACAATCTTGACGTTTATGTGGCTAATGGTATCGTTCCTTGGAGCAACCAGGTGCAACGTATACTAGATGACGGCCGTCTGCTGTTTGACCAAACAAGAACTCAGGACATCACTGCGCCAATAACAGTTTTGCTTGAAGGTCCCGTTGGATGTGGTAAAACCGCCCTTGCAGTTCAGATGGCTCTTAATTCGGATTTTCCCTTCGTCAAAATGTGTTCACCAGAAAATATGATTGGCTTCATTGAAAGTGCCAAATGTCAAACAATTAAAAAGATATTTGATGATGCTGACAAGTCTGAACTCAGCTGTATCATTGTTGATGACATAGAGCGTCTTTTAGATTATGTTGCCATTGGCCCAAGATTTTCCAACACCGTTTTACAGGCTTTACTTGTGCTGCTTAAGAAAAAGCTGAGAAAAGGTCGTAAGTTGACCGTCATTGGAACAACCACTTGTCGAGATGTACTGGAAACTATGGGGATTGTCGAAGCATTTAACACAGTCATACACGTGTCCAGTTTGTCGTCCATTGATCATCTGAAAGCAGTTTTTCAGGAAGTCAAGTTGTTCGATGCCGATGAAATCAAACAGATTGAGAGAAACATTGGTCAACAGAGGTTGTTTGTGGGCATAAAAAAATTACTCGTGATGGCAGAAATGGCTGTTCAGGTAAGCCTATACTCTTGA

Transcript

Protein

Uniprot

Uniprot term	Description
P46460	Vesicle-fusing ATPase OS=Mus musculus OX=10090 GN=Nsf PE=1 SV=2
P18708	Vesicle-fusing ATPase OS=Cricetulus griseus OX=10029 GN=NSF PE=1 SV=1
P46459	Vesicle-fusing ATPase OS=Homo sapiens OX=9606 GN=NSF PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan
PF02933	CDC48_2	Cell division protein 48 (CDC48), domain 2	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR003338	Domain	CDC48, N-terminal subdomain	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR039812	Family	Vesicle-fusing ATPase	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR029067	Homologous_superfamily	CDC48 domain 2-like superfamily	Interproscan
IPR009010	Homologous_superfamily	Aspartate decarboxylase-like domain superfamily	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR004201	Domain	CDC48, domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23078	VESICULAR-FUSION PROTEIN NSF	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005795	Cellular Component	Golgi stack	Interproscan
GO:0006891	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0035494	Biological Process	SNARE complex disassembly	Interproscan
GO:0043001	Biological Process	Golgi to plasma membrane protein transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06027	NSF, SEC18; vesicle-fusing ATPase	EC:3.6.4.6	Membrane trafficking	ko04131	deepkoala