Gene detail

Detailed information of KAK2552603.1 in Acropora cervicornis

Genomic Location: JARQWQ010000085.1:618271...636526
NR annotation: XP_029179721.2, ATP-dependent DNA helicase DDX11-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAK2552603.1

ATGTCTCAGTTGAAGGTATCGAATGAAAATCACCAAGAAGGAAAGTGCGGCACAGAAATTGAAGAGAAGGCCGAAAACATTGCTTTCTGGTGGTTTATCTGCTGTGTCACTGATGGTTGGAAACCAAGATGTGTTGTGGTGGTAAAAGGATATAAGGCACAAAAGCACATAAATGTTGAAGAAAAGAAGACAAAGAGCTGTGATTTGAAGCAATTATCTTTACATCAATCGCCGTCAATCAAACCCGCAGCTGATAAGAAGCCGGTATTTTTTCCATTTCCTTTCTCGCCATACGACATCCAGGAAGACTTCATGCACACTTTGTTTGATGTGCTCAACAATGGAGAAGGCAAGTCATTAAGTTTAATTTGTGGTGCACTGACTTGGTTAAAGAGTTATGAGGAGAGAAGACAAGAAGAGTTAGAGAATGCACTGTCAAGTTCCAATAAAGATGATAATCAAAGGAACATTGCAACAAAAGATGTACAAAATGACTCTGCATCAACACCAGACTGGGTCATAGAATTTGCTGAAAAACAAGCTAAGCAAGAAAAGGAAGACAGATTGAAGGAAGAAAGAGAAAGGATTGAAAAACAAAGGGCTCAAATTTACAAGCTCAAGAATGAAATAAGACCCGCTTTTGCCATGAAAGGGAAGAGAAAACATAGTGATGACAAGCTAAGTGACTTTCACATGGGAGAAGAATTATTGGAAGACAAAATTTCTGAAGAGATCAATGCGGTGTTAGGCAAAACTGTTAAAAAAGATCCCGATGCGGATATTGTATTGACTGAGTATTTCAGTGAAGGAGAAGATGCAGGCTCAGACCAAGAGGAAGATAATGATAAACACGAAGAGCCTCACTGCCTAAAGATTTACTATTGCAGTCGAACACACTCACAATTAGCTCAATTTGTGCGAGAGGTGCAAAAGAGTCCCTTTAATGAAAGCACAAGAGTGGTTTCCTTGGGATCAAGACAGAACCTCTGCATTAATGATGATGTTAAGCAACTAAAAAATATAAACAAAATTAATGACAGATGTTTAGAACTTCAGAAAAAAGACAAAGAGAAGAAAACATCTGATGGAGAAAAGGCTCCAAAGAGGAAAAAACTTCTGACAGGGTGTCCTTATTATTCATACCAACAGTTGCTGAGATTTCGAGACAATGTTTTGCTTGTGGTTTTACCATACAACCTACTTCTTCACAAGTCTACAAGAGAAGCTTGTGGAATAAAGCTTAATGGCAATGTAGTTATCATAGACGAGGCACACAACTTAATTGACACAATCAGCAGTGTCTACAGCGTGGAGATTACGGGTTCTCAGATTTCACGTGCCCATTCTCAGCTAACACAATATCAAGATCGTTACAGGACAAGGTTAAAAGCAAAGAATTTACTCTACATCCAGCAACTCCTGTACATTCTTATCTGCTTCTTAAACTGTTTAGGGGGGAAGGAGATGGTTTCAAATTCCAAAATGCTCTTAACAGCTCCTGCTGAAAATGGTGTTCTCACTGGTCTAAGGGAACAAAGGGTACCAGCGGAAGTGAAATTAAAAACAATCAATGACTTCTTGTTTTCTGCAAAAATGGACAACGTTAACCTTTTTAAGCTTAATGGATTTGTCGACAAATACCAGTCTGGGCAGGTAGATACAGGGCTTAATGTGGAACTGGCATACCAGAGTAGCACCTCACCACTGCAAATCATTGAGAGCTTCTTAGAAGCACTAACAAATGCTGACAAAGATGGAAGGGTGGTAGTAAATAGACAAGGTCGACTAAGCTGTTCCAGTCTCAAATTTCTTCTGTTAAATCCAGCTGTTCACTTTACCAACATTGTGAGAGAAGCAAGGGCAGTTGTTGTTGCTGGAGGAACAATGCAACCTATGTCAGATTTCAAAGATCAGTTATTCGCTTGTGCTGGGCTTCCTAATGAAAACATAGTAGAGTTCTCCTGTGGTCATGTTATTCCAGCAGAGCATTTATTGGCAGTAGCGCTCGATAGAGGACCATCAGGCAAAGAACTTGACTTCACATATCAATCCCGAGGCTCCACTGAATTGGTAAAAACTACCGGGAGAAGGAAAGATACGTCGAAAAAATGA

Transcript

Protein

Uniprot

Uniprot term	Description
Q6AXC6	ATP-dependent DNA helicase DDX11 OS=Mus musculus OX=10090 GN=Ddx11 PE=1 SV=2
F1R345	ATP-dependent DNA helicase DDX11 OS=Danio rerio OX=7955 GN=ddx11 PE=2 SV=1
Q96FC9	ATP-dependent DNA helicase DDX11 OS=Homo sapiens OX=9606 GN=DDX11 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06733	DEAD_2	DEAD_2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045028	Family	Helicase superfamily 1/2, DinG/Rad3-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR010614	Domain	RAD3-like helicase, DEAD	Interproscan
IPR014013	Domain	Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type	Interproscan
IPR006554	Domain	Helicase-like, DEXD box c2 type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11472	DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003678	Molecular Function	DNA helicase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0032508	Biological Process	DNA duplex unwinding	Interproscan
GO:0034085	Biological Process	establishment of sister chromatid cohesion	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016818	Molecular Function	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Interproscan