Genomic Location: JARQWQ010000081.1:628081...643478
NR annotation: XP_029207539.2, probable 28S rRNA (cytosine-C(5))-methyltransferase [Acropora millepora]
| CDS | ||||
| KAK2552966.1 | ||||
| Transcript |
| - |
| Protein |
| KAK2552966.1 |
| Uniprot term | Description |
|---|---|
| Q922K7 | 28S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nop2 PE=1 SV=1 |
| P46087 | 28S rRNA (cytosine(4447)-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=NOP2 PE=1 SV=2 |
| O94268 | 25S rRNA (cytosine-C(5))-methyltransferase nop2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nop2 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01189 | Methyltr_RsmB-F | 16S rRNA methyltransferase RsmB/F | Family | Interproscan |
| PF17125 | Methyltr_RsmF_N | N-terminal domain of 16S rRNA methyltransferase RsmF | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR049560 | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core | Interproscan |
| IPR023273 | Family | RNA (C5-cytosine) methyltransferase, NOP2 | Interproscan |
| IPR023267 | Family | RNA (C5-cytosine) methyltransferase | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR031341 | Domain | Ribosomal RNA small subunit methyltransferase F, N-terminal | Interproscan |
| IPR001678 | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22807 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008168 | Molecular Function | methyltransferase activity | Interproscan |
| GO:0000470 | Biological Process | maturation of LSU-rRNA | Interproscan |
| GO:0001510 | Biological Process | RNA methylation | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0008173 | Molecular Function | RNA methyltransferase activity | Interproscan |
| GO:0009383 | Molecular Function | rRNA (cytosine-C5-)-methyltransferase activity | Interproscan |
| GO:0070475 | Biological Process | rRNA base methylation | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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