Detailed information of KAK2554182.1 in Acropora cervicornis

Genomic Location: JARQWQ010000072.1:212069...221832
NR annotation: XP_044178914.1, E3 ubiquitin-protein ligase ARIH1-like isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P62972Polyubiquitin (Fragment) OS=Xenopus laevis OX=8355 PE=1 SV=2
P0C032Ubiquitin-like protein-NEDD8-like protein RUB3 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB3 PE=3 SV=2
P63048Ubiquitin-ribosomal protein eL40 fusion protein OS=Bos taurus OX=9913 GN=UBA52 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF01485IBRIBR domain, a half RING-finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR019956DomainUbiquitin domainInterproscan
IPR031127FamilyE3 ubiquitin ligase RBR familyInterproscan
IPR002867DomainIBR domainInterproscan
IPR044066DomainTRIAD supradomainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032436Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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