Gene detail

Detailed information of KAK2556322.1 in Acropora cervicornis

Genomic Location: JARQWQ010000056.1:946041...950159
NR annotation: XP_029207106.2, uncharacterized protein LOC114970800 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAK2556322.1

ATGAGAAAGGTGAAATGCGTATTGGTGGGCGACGAAAATGTCGATAAGCGAGAACTTTTCATCAAATATGTCGCCATGATGAATGCTGAATGCGAATCAGCAACTGAAGATGTGGAAACGACGTCAAACGCAGGGAGAACAAACCAAGGTCAATTGAATGATGCATTTAAAAATGGAGATAAAAAAGACAGTAAAAGAAGCACGATGCGAGGTAGTTACGAGCCATCACAACCGAACTTCCGGGTCATTCATAGCAGGGATGAGAGAGGCAGCGTGACGAGTTCAGAGTCACCCGAGGAAGCTAACGACATTTGGTCTGGCACCGTTACCATTGATGGACGTCAGTTTTTCGTAGATGTGCGTGACGCTCCCTGTAACGCAGCTTTTGATAACATCAGACGAGACAATTACCCGGATACGGACGTTTTCCTTGTTTGTTTTTCCGTTGTTCGTTTGTTGTCGTGGGAGAACGTTTTGAAAAAATGGATACCAGAAATTCAAAAGATCTGCCCCATAACTCCGTTTATTTTAGTCGGAACGCAAACAGAATGGCGCGAACTCTTGGACGAAAGAGATCCTTCCAGAAGACCGATTCATACTGTAACGGGAGAGTCTTTTGCCCATCAGGTCGGTGGTGTAAAGTACATGGAGTGTTCCACTAGTGATAATGAAATTAGGACAATTTTTGATACCGCTGTGCGCGTGAGTACGATGGATCGTATGAAACTCTCCACGTATTCGCCCGAATTTGAAACAGATGGAAGCACTTTGCTTCACCGCGCTGCTAAACTCAATCATATCCCATCTCTGGAAATCCTCGTGGATACAATCGACCTGACAGTCAAGGACAAACAGTTTCTTACTGCCTTAGACGTCGCGCTGAAAGAGGACAACTTGGACGCAACGCGCTTCCTCATTGAGAGCGGCTGCGAGATGCTCGCTCCTCCAGAACGCTGGAGGAGAGTGTGCGAATTCTGGATCGATGATAGCGCTGACTCTGAGCAAGTGGTGAATAGCGACATTACTGAGTTCACAAGACAGTTAACGTTCTTTTATACTTCCGCTTCGTTTCGCCCGCTAGGAAGAATCCTTTTGATTGGACAAAATGGTACAGACGTTGCCAAATTTGTCAACGAAACTGTCCCTATGCTTCCTGTGCGATCTTTGACCATAGTCAATGCTGAAGGACCGACGTTGTTTGATTTCTCGCAAGTGCAATCCTGCTTGGAATCTCTTACAATTACGAACTGCGATTTCGGCTCGCCGGAGTTACCTGGAACTGTGTATTCAGTGAAAAGTCTGAAGAGCTTGTGCGTCGTTAAGTCTGGCTTGTCGCGCTTGTCGGAACAACTCGGAGAGTTGAATGGCTTGCAGCGTTTGCGCCTTAGCTCAAACAAGCTACGGAGACTTCCCCACACCATTTCCAGACTGCAAAAGCTGAAGTTTGCTCATTGTGATCGAAACTTGCTGGATAATCTGCCCGATACTCTAGGATGCTTGGCCTCTCTGGAAACGTTGGACTTGAGTTATAACAAGCTGGAAAAGATGTCCCCATCCCTGGGCTTGTTGAGCAATTTGCGGAATCTTTGGTTCACGAGAAATCGCTTGAAATTTCCGCCCAATCACATTCTTAACAAAGAAACTGATTGTATTTTGGAATATCTCAGTGATTTCTTGGACGATCCTGTTGCCAACACACAGATTAAAATGATTGTGGTGGGAGGAAATCAGGTCGGCAAAACCTCCGTCGTTAAGTCTTTAAGTTTGACTAAAGACTGGAGAATTGGAGGTGTGGGAGATGTCGCGAGGACCCAAGGAGTCGAGATCTCATCGTTTGATCTCATGAGTTCGAAGTTGAAAGTATTCGATTTGGCTGGAGACGAAAATTTCTTTAGCACTCATCATTTCTTTCTTTCGGAGAACACTCTCTACCAAGTGGTTTTTGATATGAGCGCTTATGCTGTCAGCAAAACGTCGTTGTCAGTGTTCCAGCTTGGAAGGGTAGAGCTTTGGCTTCAGTTTATCTACTCGAGGGCGCCGAATTCTCACGTTCTTATCGTTGGTACTCATGCCGACGACCCGAAGCTTAACGACGGAATCCGAACACGCATTCGTGAAGACATGGAAATCCTTCTCAACAAGTATCGTCGAGTGCATAAAGACCAGTTTGAAGGGGAAGCAGTTCCAAACTGTGGCTTGTGTGAGGGGCGCCCGATTTGCGAGGGCTCCGTTGGTTCTTTTTTTTACGCCCGGGATCAAGAGAGCCCTCGAAGTTCGCCCCTTGTCCCAGAGCCCTGTATTCCTCACGTGATTGGTTATTTCGAGGTGAGTTGTCAAGGTCAGTTTCCCAAGAATTTTTTTAGTTCGAAGAACAGAAGCCTGCAGAAGCTCAAAGTTGCAGTGGATTCTGGTGCCCGCGTCCTTCTCAATACGAAGGTCAGTTCCCGAATACCGCAAAAGTGCGTATACGTGCGGGATCGGATTCACGAGATGTGCAATGGGGAGAGCGAGTTAAAAAAGTGGCCGCTGCTCACATATGACCGACTGCGTGAGATTGCCAATGGCTGTGGAGTCGAGCAGGAATTCAAGCTCAAAGCGCTTATGACGTATTTCCATTCTCAAGGAGAAATTCTATGGTACGAAGACATGCCCGGTGTCGGTGATGTCATTTTCATCGATCCTTCGTGGGTGTCGGCGAAGTTTTGTCATCTTGTCGGCTCAAATTCGGGCGCAAGCTCGGGAATGGACGGAATTTTACGCATTGACAACTTGGCCAAGACCTGGCCTGATGTACCCGAAAGAGAGCGATTTTCCATGCTGACGTTGTTCAGAAACCTCGGTTTGTGCATTCCCCTCTCTGACACCGAAGAGCTTGTACCTTTTCAACTGCCCATTGGACACCCCGACAAGAGCACGTGGTCCGACCAACCTTCGGATGGTGAGCGACAGATCAGTTGTGAGTTTCAATTTAGTTTTCTTCCTCCGACATTTTTCAGTGACCTTATCGTGACCATTAAGAGACGTAATCTGCTCAACTGCTACGAAGTCGAGCCAACATTCTACCGCTTCCACATGGTATTCGCTACGACATCCATGGCCGACGTGGGCTGCTCTTTACACTCCAAAAAAGCAGCAGATCCTCATTTGGCTGAAAACCTTAGAGTGCATAGAGTGAGCATCGAAGGTGTCCCGTTTGAGAATAAACTGAAGGTAGTCATTCGAGGATTCCAGCCCTGTTGTGTTCTCCCTGACTTAAGAGCCGCCATAAAGATGTTGGTGGACACGCGTTACCCGGGTATCCGACACATCCGACGAATTGTCTGTCCCGTCTGCGAACGCACCGGACTCAAGAAACCTTCGCTACTCAACAACATCTACCCCGATGAGGTGAACTTTTGTTCTTGGGGCCACGCTCTGGGGAAAGAGGACGCCATCATCGCGGGTGATGTGCCAAGGATCGAATCTTGTCTTGATCTGCCATCTAAAGTAACAACCAGTGAAGTTAGGCTCGGAGTATTTTACAGTGAAAGTGGAAGTATCCTGGATGACTGCTATTGTCCAAGACTTCTGGCAGTCTTCCCCATCGGCTTTGAAAGTGCGCCATTCAAAAGTCGCCTTCATGTGAATTCGCCCATAACCGATGGCTTTGCAGTGCATTTCCTTTGCGAATGTCCTGGTTACTGGCATCTCACCGATGCACCAGGCTTTCGCATTCCCAACATGCAGAATTTCCTTGATATCTTCGGTGCGCGCGCAAGCAAACTCTTAAAGCTGGCGTTCATGTTGCGTGACAATGACTCAGAAAATGGCTCTCGTGCGTCACGCGTCCCAGTGAATATTGTTTTATGGGATTCGCGTAAGTTTCGTGACATGCTAATAACAGACATTCAGGATCTTCTAGAACACTACTTCTGTTTGTTTCCCGAGCTTAAAGAGAGCTGTACGAGCTTCATGCAAGAAGACCTGAAATATCTTCTGAGGTACGACGGGCTGAGCCGAGCCACGTTGTGTAGGCTTTTGGGGATTTCGCCAGACTGGTGGAGGGTAGGCCCTCTTGTATGTTCGTATGACAGTCGCTCAAAAGAACATCTGTGGCTATGCGACAAGCATGCAGTGTAA

Transcript

Protein

Uniprot

Uniprot term	Description
P60763	Ras-related C3 botulinum toxin substrate 3 OS=Homo sapiens OX=9606 GN=RAC3 PE=1 SV=1
P60764	Ras-related C3 botulinum toxin substrate 3 OS=Mus musculus OX=10090 GN=Rac3 PE=1 SV=1
P62998	Ras-related C3 botulinum toxin substrate 1 OS=Bos taurus OX=9913 GN=RAC1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF13637	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003578	Family	Small GTPase Rho	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR020859	Domain	Roc domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24072	RHO FAMILY GTPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0006897	Biological Process	endocytosis	Interproscan
GO:0007163	Biological Process	establishment or maintenance of cell polarity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan
GO:0032488	Biological Process	Cdc42 protein signal transduction	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan