Detailed information of KAK2558171.1 in Acropora cervicornis

Genomic Location: JARQWQ010000045.1:1479745...1492438
NR annotation: XP_029188780.2, LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2B-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q01097Glutamate receptor ionotropic, NMDA 2B OS=Mus musculus OX=10090 GN=Grin2b PE=1 SV=3
Q00960Glutamate receptor ionotropic, NMDA 2B OS=Rattus norvegicus OX=10116 GN=Grin2b PE=1 SV=1
Q5R1P3Glutamate receptor ionotropic, NMDA 2B OS=Canis lupus familiaris OX=9615 GN=GRIN2B PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040fn2Fibronectin type II domainDomainInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000562DomainFibronectin type II domainInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan

TOP