Gene detail

Detailed information of KAK2558456.1 in Acropora cervicornis

Genomic Location: JARQWQ010000044.1:638026...645419
NR annotation: XP_029203650.1, tRNA (guanine(26)-N(2))-dimethyltransferase-like isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q9NXH9	tRNA (guanine(26)-N(2))-dimethyltransferase OS=Homo sapiens OX=9606 GN=TRMT1 PE=1 SV=1
Q3TX08	tRNA (guanine(26)-N(2))-dimethyltransferase OS=Mus musculus OX=10090 GN=Trmt1 PE=1 SV=3
Q9SRU7	tRNA (guanine(26)-N(2))-dimethyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=At3g02320 PE=1 SV=3

Gene family	Subfamily
Transcription Factors Family	zf-CCCH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02005	TRM	N2,N2-dimethylguanosine tRNA methyltransferase	Family	Interproscan
PF00642	zf-CCCH	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036855	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR002905	Family	tRNA methyltransferase, Trm1	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR042296	Homologous_superfamily	tRNA methyltransferase, Trm1, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10631	N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0008033	Biological Process	tRNA processing	Interproscan
GO:0160102	Molecular Function	tRNA (guanine(10)-N2)-methyltransferase activity	Interproscan
GO:0002940	Biological Process	tRNA N2-guanine methylation	Interproscan
GO:0004809	Molecular Function	obsolete tRNA (guanine-N2-)-methyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14773	UTP23; U3 small nucleolar RNA-associated protein 23	-	Ribosome biogenesis	ko03009	deepkoala