Gene detail

Detailed information of KAK2561008.1 in Acropora cervicornis

Genomic Location: JARQWQ010000034.1:197624...201525
NR annotation: XP_015771454.1, PREDICTED: 72 kDa type IV collagenase-like isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O13065	Matrix metalloproteinase-18 OS=Xenopus laevis OX=8355 GN=mmp18 PE=2 SV=1
O77656	Collagenase 3 OS=Bos taurus OX=9913 GN=MMP13 PE=2 SV=1
P21692	Interstitial collagenase OS=Sus scrofa OX=9823 GN=MMP1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00413	Peptidase_M10	Matrixin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036365	Homologous_superfamily	PGBD-like superfamily	Interproscan
IPR021190	Family	Peptidase M10A	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan
IPR033739	Domain	Peptidase M10A, catalytic domain	Interproscan
IPR001818	Domain	Peptidase M10, metallopeptidase	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10201	MATRIX METALLOPROTEINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0030574	Biological Process	collagen catabolic process	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan