Detailed information of KAK2564906.1 in Acropora cervicornis

Genomic Location: JARQWQ010000021.1:1737076...1745390
NR annotation: XP_029190556.1, transformer-2 protein homolog alpha-like isoform X3 [Acropora millepora]
Species abbreviation ACERV · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6PFR5Transformer-2 protein homolog alpha OS=Mus musculus OX=10090 GN=Tra2a PE=1 SV=1
Q13595Transformer-2 protein homolog alpha OS=Homo sapiens OX=9606 GN=TRA2A PE=1 SV=1
Q3ZBT6Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN=TRA2B PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005995 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR050441
all species →
FamilyRNA-binding motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48034
all species →
TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0005681
all species →
Cellular Componentspliceosomal complexInterproscan
GO:0048026
all species →
Biological Processpositive regulation of mRNA splicing, via spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAK2564906.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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