Gene detail

Detailed information of KAK2565045.1 in Acropora cervicornis

Genomic Location: JARQWQ010000021.1:2251663...2280464
NR annotation: XP_029190539.2, sodium/glucose cotransporter 5-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAK2565045.1

ATGGACGTTTCGCCCGGTTTGTCTGCCATTGATTACAATGCAAGATTCTTTGAAACATCACAGCGAACCATCACAACACTTCGCCACGTTCATGTGTCACAACAAGGACTGATAGGAAGTTTAGTACGTCTTCAATCGAGTCAAGCTGAAACTCTGAGCTTAAAAGAAAATCTTTACCGTATTGTACCAGAAAAGCAGAAAGAAGTCGCCGAGTTCCGAAAACAATATGGAGATAAAAGCCTCGGAGAATATACAGTCGATCAGATTCGTGGGTTTGATTTTGTATCTAATGAAGAAGTACTCGCAAAGTCTGATGTTGTAGACATCGAAGTCCTGCTTGCACAAAGTCGTTTACGGTGGCTTGGGCATGTTTCACGTATGGAAGATAATAGAACTTGTAAACGGTTATTGTATGGTGAGCTTGCAGATGGTTCTCGACCAATTGGTCGCCCCAAGCTCCGTTTTAAGGACAACTGCAAAAGCATTTTAAAAACTGGGAATATTCTGCACAACTGGAATGATACAGGCATTGAGTTACGTGGTTACACTATTCCCCAGTGCCAAGAGCTTTTGCCAAAGGCTAATGGAGGAGAGGAGCCTTTGCCAGAAGGAATATTTTGGTTGCTGATGACTGGTGAAATACCAACTAAAGCACAGGTTGATAACTTGTCCAAAGAATGGGCTGCTCATGCTGACTTGCCACAACATGTTGTCCAAATGTTAAATAACTTCCCTGAAACTCTTCATCCCATGAGTCAGTTTAGTGCTGCTATCACAGCAATGAACAGTGAGAGCAAATTTGCAAAGGCATATGCACAGGGAGTGCACAAAAACACATACTGGGAGCATATCTTTGATGACACCATGGATTTGACTGCAAAAATAACCACAGTGGCAGCATACATCTACAGGAATGTGTTTAAAGATGGAAAAGTAACTCCTGTAGATCCAAACAAGGACTGGGCTGATAATCTGGCTAGTATGCTGGGATATGACGACCCTATGTTCCACGAGATGATGAGGCTCTATTTGGTTCTACATGCTGACCACGAGGGCGGCAACGTTAGTGCACACACCACTCACCTTGTCGGTAGTGCTCTATCTGATCCTTATCTCTGTCTGGCTGCTGGTATGAATGGCCTTGCTGGACCATTGCATGGGCTTGCCAACCAGGAAGTTTTAATCTGGATAACAAATATGCTTCAAGAAGTTGGAGATGATCCATCAGATGAAAAAGTCAAGGAGTTTGTATTGAGTACTTTAAAAGGCGGGCAAGTTGTACCTGGTTTTGGTCATGCAGTTCTGCGGAGAACAGACCCCCGATACACAGCCCAGCGGGAATTTGCTTTGAAACATTTGCCAGATGACCCTTTGTTTAAACTTTGTGGTCAGCTTTTTAAGATTGTTCCGGATATATTGTTGGATCAAGGAAAAGCAAAAAACCCCTGGCCAAATGTTGATGCACACAGTGGAGTCTTACTTCAGTTCTATGGCTTAAAGGAAATGAATTTCTACACAGTGCTCTTTGGAGTGTCACGTGCGCTTGGCGTGCTTTCTTCATTGGCCATGTATAAGTCAAATCGCGGCACTGTGAGTGGATACTTTCTGGCTGGCAGATTTATCACTTGGCTTCCTGTTGGTGCATCCTTATTTGCCAGTAATATTGGAAGTGAACATTTCATTGGCTTGGCAGGATCTGGAGCAGCAGCTGGGATTGGCGTGGGAGCATTTGAATTGAATGCACTGATCTTGCTGCAGTTGCTTGGTTGGGTATTCTTACCTGTCTATATTGCGGGAGGGATTTGTACCCTGCCAGAGTATATTAGCCGTCGCTATGGTGGGAAAAGACTGAGGATGTGGCTATCAATTCTTTCTCTTCTTCTTTATATCTTCACTAAGATATCAGTCAATTTGTTCTCTGGGGCTTTGTTTATTCGGTTAGCTCTCGGATGGAACCTTTATTTAGCCATTTTGTTGATGCTGGCAATGACCTGTCTTTGCACAATTACTGGTGGACTGACAGCTGTCATTTACACTGATACCCTGTGTACCTTTCTAATGGTGGTGGGATCTCTCACAGTCATGGGACGTGGTTTCTCAGAGGTTGGTGGTTATGAAGGTTTGAAGGAAAAGTACATGAAGGCAATGTCCAATGACACCTTGTCCTCCAACAGTTCCTGTGGTCGACCAAGGGAGGATTCATTCATTATGCTGCGTGATCCTTTCAACTCTGATATGCCCTGGGCTGGTTTCCTCTTTGGGCAAACAATAGCCTCAATTTGGTACTGGTGTGCAGATCAGGTTATTGTTCAAAGAGCCCTGGCTGCTAAAAGTCTGTCACATGCTCAGGGAGGCTGTCTGCTTGCTGGCTATATCAAAATCCTCCCACTCTTCACCCTTGTGATGCCAGGAATGATCAGCCGCATCTTGTCGCCAGATCGTGTTGCTTGTAGTGTTCCTGAGAAATGCATGGAGATTTGCGGCAGCAAAGTTGGCTGCACTAACATTGCTTACCCAGAGCTTGTGCTGAGACTTATGCCTACAGGTCTGAGAGGATTAATGATGGCTGTGATGATGGCAGCATTGATGAGCGACTTGACGTCCATCTTTAACAGTGCCAGCACACTGTTTACTATTGATGTTTATGGAAAAATCCGCCCAAAGGCTTCCGTTAGAGAACTCATGATTGTAGGAAGGATAATGGTTGCAATCATGACCGGTATTGGTATTCTCTGGATTCCTGTGGTGCAGAATGTACAGGGAGGCCAGCTTTTCATCTACATTCAAGCTGTCAGTGCATACTTTTCTCCTCCAATAGCAGCGCTCTATCTGATTTCCATCCTGTGGACGGGAGGAACGGAGAAGGGTGCTTTCTGGGGCATGATAATGGGTTTCATCGTTGGTGCGATTCGTATGATCCTTGACTTCACCCACCTTGCTCCTCCATGTGGTGAAGAGGACACTCGCCCATCAATCATCGCCAAGGTTCATTACATGTATTTTGCGCTGATTCTTTTCTGGATCACTGCTATCGCCATCGTCGTCATCAGTTTGTTCACGAAGCCAATGGAGGGAGCAAACACTGCTCGCCTAACTTGGTGGACTCGGCATGACAAACAGTCAGATACTGACGTCATGGAAGAAGCTAGAGATGAAGAGGTGGAAATGCAGCACATTTCAGAGGAGGATGACGAAAACGCGGAAGAAGAAGCGAAAGTTGTTACTGACGAGACGCCAGCCGTTAACACCAAAATATACAAGAATACATTGGAATCCAAAACCAAGCGTTTTTATTCTTGGTTCTGTGGCTATGAAGCAGGAACAGAGGAAGCAAAGAAAGCGGCCCACCAACAACATAAACGCTTGGCTGAAATCACATCTCTGGAGCAAGATCCTGTTGCAAAAATCTTCCTCAACGTCAATGTGGTTATCATTCTTATTGTTGGTCTAGTTCTGTTCATTTACTTTTCGGTGTAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q8VDT1	Sodium/glucose cotransporter 4 OS=Mus musculus OX=10090 GN=Slc5a9 PE=1 SV=3
P11170	Sodium/glucose cotransporter 1 OS=Oryctolagus cuniculus OX=9986 GN=SLC5A1 PE=1 SV=1
Q8C3K6	Sodium/glucose cotransporter 1 OS=Mus musculus OX=10090 GN=Slc5a1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00285	Citrate_synt	Citrate synthase, C-terminal domain	Domain	Interproscan
PF00474	SSF	Sodium:solute symporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016142	Homologous_superfamily	Citrate synthase-like, large alpha subdomain	Interproscan
IPR019810	Active_site	Citrate synthase active site	Interproscan
IPR002020	Family	Citrate synthase	Interproscan
IPR001734	Family	Sodium/solute symporter	Interproscan
IPR036969	Homologous_superfamily	Citrate synthase superfamily	Interproscan
IPR038377	Homologous_superfamily	Sodium/glucose symporter superfamily	Interproscan
IPR010109	Family	Citrate synthase, eukaryotic-type	Interproscan
IPR016143	Homologous_superfamily	Citrate synthase-like, small alpha subdomain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11819	SOLUTE CARRIER FAMILY 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046912	Molecular Function	acyltransferase activity, acyl groups converted into alkyl on transfer	Interproscan
GO:0005412	Molecular Function	D-glucose:sodium symporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0004108	Molecular Function	citrate (Si)-synthase activity	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0006101	Biological Process	citrate metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08711	PDR, CDR1; ATP-binding cassette, subfamily G (WHITE), member 2, PDR	-	Transporters	ko02000	deepkoala